Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0843
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 148 2e-36
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 148 2e-36
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 148 2e-36
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 148 2e-36
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 148 2e-36
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 148 2e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 146 6e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 110 6e-25
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 110 6e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 109 1e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 109 1e-24
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 94 4e-20
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 74 6e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 70 1e-12
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.036
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.036
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.1
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.4
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 9.4
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 27 9.4
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine pal... 27 9.4
AC024809-10|AAF59547.1| 272|Caenorhabditis elegans Hypothetical... 27 9.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 109 bits (261), Expect = 1e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 107 bits (257), Expect = 4e-24
Identities = 46/51 (90%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 65 APLNPKANREK 75
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 69 PKANREKMTQIMFET 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 95 APLNPKANREK 105
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/33 (93%), Positives = 33/33 (100%)
Frame = +2
Query: 158 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 99 PKANREKMTQIMFET 113
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 148 bits (359), Expect = 2e-36
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 109 APLNPKANREK 119
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 113 PKANREKMTQIMFET 127
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 146 bits (355), Expect = 6e-36
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 427 APLNPKATERR 459
APLNPK+ +
Sbjct: 108 APLNPKSNREK 118
Score = 103 bits (248), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 110 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 112 PKSNREKMTQIMFET 126
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 360
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 110 bits (264), Expect = 6e-25
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 360
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 109 bits (261), Expect = 1e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 81.8 bits (193), Expect = 2e-16
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 360
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 109 bits (261), Expect = 1e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 351
G +DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 94.3 bits (224), Expect = 4e-20
Identities = 38/69 (55%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 432
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 433 LNPKATERR 459
LNP R
Sbjct: 114 LNPLKNRER 122
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 244
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 73.7 bits (173), Expect = 6e-14
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 232 RDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 408
R G +D VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 409 PVLLTEAPLNPKATERR 459
+LLTE PLNP + +
Sbjct: 106 KLLLTEPPLNPNSNREK 122
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 220
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 433 LN 438
LN
Sbjct: 124 LN 125
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 104 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 316 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKATERR 459
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A +
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREK 141
Score = 33.5 bits (73), Expect = 0.082
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.036
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 271 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 375
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.036
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 271 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 375
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 158 KAGFAGDDAPRAVFPSIVGRPRHQG 232
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 401 RNTQSCSLRLPSTPRPQREDDPDHV 475
R+ SCS P+ PRPQ ED ++
Sbjct: 163 RSRPSCSTSTPTPPRPQVEDKSQYL 187
>Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 401 RNTQSCSLRLPSTPRPQREDDPDHV 475
R+ SCS P+ PRPQ ED ++
Sbjct: 163 RSRPSCSTSTPTPPRPQVEDKSQYL 187
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 183 ASSPAKPALHIPEPLSTTNAATSS 112
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 183 ASSPAKPALHIPEPLSTTNAATSS 112
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 183 ASSPAKPALHIPEPLSTTNAATSS 112
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 183 ASSPAKPALHIPEPLSTTNAATSS 112
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 310 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 411
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 310 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 411
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 208 RGKAPPSGRDGRYGTEDSYVGDEAQSKRG 294
RGKA +GRDGR G E + Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 374 STMSCVSPPRNTQSCSLRLP 433
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 374 STMSCVSPPRNTQSCSLRLP 433
ST C SP +TQ+C RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -3
Query: 365 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPT*ESSVPYRPSRPDG 222
CQ+FS QLVT+ SMG +++++ L L AS + + ++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +1
Query: 337 NWDDMEKIWHHTFYNE--LRVAPEEHPV 414
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine
palmitoyl transferaseprotein 4 protein.
Length = 748
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 359 FGIIPSTMSCVSPPRNTQSCSLRLPSTPRPQREDDPD 469
+G++ + ++PP+ SC LP+ P P +D D
Sbjct: 119 WGVLRKVLLTIAPPQ-LSSCDRLLPNLPLPALQDTVD 154
>AC024809-10|AAF59547.1| 272|Caenorhabditis elegans Hypothetical
protein Y53G8AR.1 protein.
Length = 272
Score = 26.6 bits (56), Expect = 9.4
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 389 VSPPRNTQSCSLRLP-STPRPQREDDP 466
++PP T + +++ P +TP+P +E DP
Sbjct: 196 LNPPTTTTTTTVKPPPATPKPAKEKDP 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,642,579
Number of Sequences: 27780
Number of extensions: 296636
Number of successful extensions: 1059
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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