Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0843
(484 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 145 1e-35
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 145 1e-35
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 145 2e-35
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 145 2e-35
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 144 2e-35
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 144 2e-35
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 142 8e-35
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 142 8e-35
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 142 8e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 132 1e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 124 3e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 120 4e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 79 2e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 4e-13
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 62 2e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 2e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 36 0.019
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 32 0.23
At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family... 30 0.94
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 2.2
At3g58650.1 68416.m06537 expressed protein 28 2.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 3.8
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 28 3.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.0
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 5.0
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 27 6.6
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 8.8
At5g01400.1 68418.m00053 expressed protein contains low similari... 27 8.8
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 145 bits (352), Expect = 1e-35
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (352), Expect = 1e-35
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (351), Expect = 2e-35
Identities = 63/71 (88%), Positives = 66/71 (92%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (351), Expect = 2e-35
Identities = 63/71 (88%), Positives = 66/71 (92%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 62/71 (87%), Positives = 66/71 (92%)
Frame = +1
Query: 247 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 427 APLNPKATERR 459
APLNPKA +
Sbjct: 110 APLNPKANREK 120
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 142 bits (345), Expect = 8e-35
Identities = 60/69 (86%), Positives = 66/69 (95%)
Frame = +1
Query: 253 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 433 LNPKATERR 459
LNPKA +
Sbjct: 112 LNPKANREK 120
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 142 bits (345), Expect = 8e-35
Identities = 60/69 (86%), Positives = 66/69 (95%)
Frame = +1
Query: 253 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 433 LNPKATERR 459
LNPKA +
Sbjct: 112 LNPKANREK 120
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 142 bits (345), Expect = 8e-35
Identities = 60/69 (86%), Positives = 66/69 (95%)
Frame = +1
Query: 253 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 433 LNPKATERR 459
LNPKA +
Sbjct: 112 LNPKANREK 120
Score = 83.8 bits (198), Expect = 5e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFET
Sbjct: 114 PKANREKMTQIMFET 128
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 132 bits (319), Expect = 1e-31
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = +1
Query: 253 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
+D++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAP
Sbjct: 53 KDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAP 112
Query: 433 LNPKATERR 459
LNPK +
Sbjct: 113 LNPKVNREK 121
Score = 84.2 bits (199), Expect = 4e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 256
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFE+
Sbjct: 115 PKVNREKMTQIMFES 129
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 124 bits (299), Expect = 3e-29
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = +1
Query: 256 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 435
D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPL
Sbjct: 8 DLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPL 67
Query: 436 NPKATERR 459
NPKA +
Sbjct: 68 NPKADREK 75
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ REKMTQIMFET
Sbjct: 69 PKADREKMTQIMFET 83
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 120 bits (290), Expect = 4e-28
Identities = 54/76 (71%), Positives = 60/76 (78%)
Frame = +1
Query: 232 RDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 412 VLLTEAPLNPKATERR 459
VLLTEAP NPKA +
Sbjct: 94 VLLTEAPYNPKANREK 109
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 223
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 438 PQGHREKMTQIMFET 482
P+ +REKMTQIMFE+
Sbjct: 103 PKANREKMTQIMFES 117
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 79.0 bits (186), Expect = 2e-15
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +1
Query: 253 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 432
+D VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 433 LNPKATERR 459
LNP +
Sbjct: 111 LNPSKNREK 119
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 220
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 70.9 bits (166), Expect = 4e-13
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = +1
Query: 256 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 426
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 427 APLNP 441
+PL P
Sbjct: 127 SPLTP 131
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 211
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +1
Query: 262 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 438
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 214
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 61.7 bits (143), Expect = 3e-10
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 235 DGRYGTEDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 411
D G Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 412 VLLTEAPLN 438
+LL E PLN
Sbjct: 121 MLLAEPPLN 129
Score = 57.2 bits (132), Expect = 5e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 113 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 214
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 304 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKATER 456
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + +R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 220
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 128 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 229
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 35.5 bits (78), Expect = 0.019
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 363 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-CPIPTITP*WRGLPTIEGNT 193
P L V+ ++ D + + + + YI + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 192 ARGASSPAKPALHIPEPLSTTNAATSS 112
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 313 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKA 447
PIE G++ +WD ME + + Y L E +L T+ PKA
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKA 102
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 125 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 217
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At2g35640.1 68415.m04371 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 340
Score = 29.9 bits (64), Expect = 0.94
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 368 IPSTMSCVSPPRNTQSCSLRLPSTPRP 448
IP+T+ PP QS SL LPS P+P
Sbjct: 187 IPTTIVLSLPPPPPQSLSLSLPSPPQP 213
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 202 LDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK 309
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 196 VPLDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 357
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 271 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 399
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 271 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 399
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 359 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 270
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 319 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP--KATERR*PRSCSKH 483
EHGI +D EK+W F+ + +LL + + P +AT+R P + +
Sbjct: 234 EHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASY 290
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 225 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 103
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 205 DRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIV 333
D G+ G D G E+ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 323 CSMGYLRVRIPLLLCASSPT*ESSVPYRPSRP 228
C G +++ +P+L A SP+ SS P PS P
Sbjct: 108 CKNG-MKLAVPVLAAAPSPSTPSSPPSTPSTP 138
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 410 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT 264
GC G T++ L C+ +S+ + TIP + Y + PL LC T
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDT 502
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 279 CLISYIRVLCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 112
CL Y + + I R + + N + AS P K A+H+ P+ +SS
Sbjct: 930 CLSLYFALCTKVLRIFTILRLMTNLVFNIYKNASDPVKQAIHLQIPILVRTMGSSS 985
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,088,430
Number of Sequences: 28952
Number of extensions: 282279
Number of successful extensions: 838
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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