BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0842 (597 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508,199... 33 0.23 11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204... 33 0.23 07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008... 32 0.40 03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158,853... 32 0.40 06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208... 31 0.70 02_05_1265 - 35326506-35326773,35326944-35327109,35327194-353273... 31 0.70 12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 31 0.92 03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565... 30 1.2 03_02_0459 + 8649448-8651994 25 2.5 04_04_0895 - 29168107-29168229,29168617-29170068 29 2.8 01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034... 29 2.8 01_01_0267 + 2201404-2202501 29 2.8 11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 29 3.7 02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 29 3.7 01_06_0922 - 33022709-33023545 29 3.7 02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 28 4.9 11_01_0066 - 536281-537196,537397-537452 27 8.6 01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 27 8.6 >12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508, 1990601-1990717,1990801-1990966,1991323-1991490, 1991734-1993052 Length = 787 Score = 32.7 bits (71), Expect = 0.23 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593 T FP EGS HTP H +F++K Sbjct: 467 TRFPPEGSKHTPPHQSCDFRWK 488 Score = 31.1 bits (67), Expect = 0.70 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561 GE K ++ ++M ++QLGI+HA+G ++ DL A P + R P + T Sbjct: 419 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAFDPKEKVWTRFPPEGSKHTP 478 Query: 562 P 564 P Sbjct: 479 P 479 >11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401, 2043572-2043765,2043858-2043974,2044059-2044224, 2044430-2044597,2044741-2046047 Length = 772 Score = 32.7 bits (71), Expect = 0.23 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593 T FP EGS HTP H +F++K Sbjct: 463 TRFPPEGSKHTPPHQSCDFRWK 484 Score = 31.1 bits (67), Expect = 0.70 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561 GE K ++ ++M ++QLGI+HA+G ++ DL A P + R P + T Sbjct: 415 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAFDPKEKVWTRFPPEGSKHTP 474 Query: 562 P 564 P Sbjct: 475 P 475 >07_03_1557 - 27699675-27699972,27700546-27700630,27700741-27700847, 27700942-27701135,27701252-27701368,27701466-27701631, 27701723-27701887,27702185-27703428 Length = 791 Score = 31.9 bits (69), Expect = 0.40 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593 T FP EGS +TP H+ +FK+K Sbjct: 441 TKFPPEGSKYTPPHNSCDFKWK 462 >03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158, 8530579-8530689,8530845-8530993,8531087-8531217, 8531322-8531421,8532060-8532366 Length = 505 Score = 31.9 bits (69), Expect = 0.40 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593 T FP EGS TP HH +F++K Sbjct: 156 TRFPPEGSKFTPPHHSVDFRWK 177 >06_03_0539 + 21919115-21919313,21919474-21919582,21920595-21920819, 21921140-21921239,21921782-21921865,21922000-21922058, 21922578-21922770 Length = 322 Score = 31.1 bits (67), Expect = 0.70 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -1 Query: 438 RSHDLRGLYLLVCDLSALADAPVSDLPVRLVNFADRAHWADGWVVRYIFFGDRTPVAIIV 259 R ++L + ++V D+S D + + F D D W+ RY F G P A ++ Sbjct: 178 RENELSNVEIIVADISKFEMERSFDRIISIEMFEDNNE--DDWITRYFFTGGTMPSANLL 235 Query: 258 L--ATDCSVA 235 L D S+A Sbjct: 236 LYFQDDVSIA 245 >02_05_1265 - 35326506-35326773,35326944-35327109,35327194-35327351, 35327779-35327966,35328046-35328156,35328311-35328476, 35328718-35328885,35329374-35330623 Length = 824 Score = 31.1 bits (67), Expect = 0.70 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +3 Query: 471 PSVEARTRSTDAGFMTVETTNFPHEGSNHTPAHHYSEFKFK 593 P + R++D G FP EGS TP+H +FK+K Sbjct: 425 PIQKREVRASDFGPRASFWMTFPKEGSRLTPSHPAEDFKWK 465 >12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983, 7682701-7682824,7683590-7683723 Length = 1121 Score = 30.7 bits (66), Expect = 0.92 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +1 Query: 475 ASKPERDLLMQAS*PSRRRISPTKDRTTRPPITIPSSNSKR 597 +S+ L +Q+S PSRR +P ++T PP PS S+R Sbjct: 125 SSRCSPPLSLQSSTPSRRSPTPPGNKTLTPPRRSPSPASRR 165 >03_05_0845 - 28155065-28155374,28156201-28156342,28156375-28156505, 28156591-28156784,28156859-28156969,28157234-28157399, 28157501-28157668,28157766-28158787 Length = 747 Score = 30.3 bits (65), Expect = 1.2 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561 G+ K ++ ++M +QLGI+H++G A+ P R+L P + R P + T Sbjct: 320 GQTISKGHKNYELMLQLQLGIRHSVGKSAAVPMRELSPADFDPKEKFWTRFPPEGSKVTP 379 Query: 562 P 564 P Sbjct: 380 P 380 Score = 29.9 bits (64), Expect = 1.6 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593 T FP EGS TP H S+F++K Sbjct: 368 TRFPPEGSKVTPPHSSSDFRWK 389 >03_02_0459 + 8649448-8651994 Length = 848 Score = 25.0 bits (52), Expect(2) = 2.5 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 550 DPSWGKFVVSTVMKPASVDRVR 485 DP WG ++ST++K D +R Sbjct: 751 DPDWGFGILSTLVKLEDSDHIR 772 Score = 22.6 bits (46), Expect(2) = 2.5 Identities = 10/33 (30%), Positives = 13/33 (39%) Frame = -3 Query: 370 VRSSGPTCELC*SRPLGRRLGRKVHFFRRSNSC 272 +R TC +C +G R H F N C Sbjct: 771 IRHGRHTCSICRYPIIGSRFKETKHSFSLCNRC 803 >04_04_0895 - 29168107-29168229,29168617-29170068 Length = 524 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +2 Query: 188 DHIEVMESSVLKKSENATEQSVA---RTMIATGVRSPKKMYLTTQPSAQWARSAKFTS 352 D +M+ S+ N SVA +++ GV SP++M + + W R A +T+ Sbjct: 347 DPAGIMQQSICYDGGNRWTVSVAWGFAVLVSRGVMSPREMEMPARTFLNWYRRADYTA 404 >01_06_1428 - 37301697-37302175,37302300-37302471,37302570-37303403, 37303847-37304012,37304334-37304573,37304765-37304905, 37305623-37305735,37306549-37306614,37307242-37307480, 37307615-37307897 Length = 910 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = -2 Query: 581 LGIVMGGRVVRSFVGEIRRLDGHEACISRSRSGFDARPPIACWMPSCIDPMICEDCIFL 405 +G MGG+V F R D E+ + G + P+ W P D M+C++ +++ Sbjct: 144 VGHSMGGKVALDFAESCSRGDYGESADLPKQLG---QTPLEGWFPDNYDRMLCQEILWV 199 >01_01_0267 + 2201404-2202501 Length = 365 Score = 29.1 bits (62), Expect = 2.8 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Frame = +2 Query: 275 GVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASAR--AERSHTRRYSPRR 427 G+R + M QP+ WAR F SD G R + H ++ P R Sbjct: 159 GLRRGRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLR 211 >11_06_0645 - 25814302-25814759,25814853-25815005,25815032-25815214, 25815342-25815531,25815624-25815784,25816136-25816623, 25817035-25817075 Length = 557 Score = 28.7 bits (61), Expect = 3.7 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +1 Query: 304 YDPAVGPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGS 438 Y GP G+ S +++ +GH V E G I+Y +I + GS Sbjct: 450 YTETPGPGGSYSA---AEQNLGHLSVSEAGSISYNEISAVNEAGS 491 >02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 Length = 1143 Score = 28.7 bits (61), Expect = 3.7 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +2 Query: 206 ESSVLKKSENATE-QSVARTMIATGVRSPKKMYLTTQPSAQW-ARSAKFTSRTG 361 E +LK E A + V T+I+ G+R T PS +W +A+ TSR+G Sbjct: 949 EEQMLKVLEIACKCVKVDTTIISCGIREYHTSTNATSPSLEWEENAAQLTSRSG 1002 >01_06_0922 - 33022709-33023545 Length = 278 Score = 28.7 bits (61), Expect = 3.7 Identities = 24/79 (30%), Positives = 32/79 (40%) Frame = +2 Query: 185 SDHIEVMESSVLKKSENATEQSVARTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGR 364 SD M + +SE A+E SVA + + RSP K +P + A SR R Sbjct: 90 SDLGSCMSLATDDRSEAASESSVATSSVTGPERSPGKPARRKRPVSVSGELAHAISRRDR 149 Query: 365 SDTGASARAERSHTRRYSP 421 + A RS SP Sbjct: 150 AAAAAYGVRSRSARASASP 168 >02_04_0232 + 21130122-21130454,21130895-21131053,21131424-21131582, 21132420-21132512,21133321-21133437,21133623-21133697, 21133878-21134104,21134200-21135073 Length = 678 Score = 28.3 bits (60), Expect = 4.9 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 Query: 426 DHGIDTARHPARYRRPSVEARTRSTDAGFMTVETTNFPHEGSNHTPAHH 572 DHG +R R+ S+E + + F+ +TT P GS T HH Sbjct: 476 DHGKVRSRKNRSERQESLEPGSSGRSSDFIDQDTTESP-SGSKSTGRHH 523 >11_01_0066 - 536281-537196,537397-537452 Length = 323 Score = 27.5 bits (58), Expect = 8.6 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 455 WMPSCIDPMICEDCIFLYVISPPSP 381 WM CI P++ DC Y S P+P Sbjct: 173 WMKPCIGPVLACDCEPEYFDSDPAP 197 >01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798, 28085948-28086253,28086369-28086643,28087034-28087252, 28087486-28089015,28089236-28089397,28089512-28089666, 28090195-28091064,28091363-28091832,28091917-28091981, 28092105-28092448,28092531-28092710,28092817-28092920, 28093053-28093162,28093648-28093744,28094138-28094238, 28094324-28094476,28094561-28094674,28094795-28094884, 28094960-28095307 Length = 2157 Score = 27.5 bits (58), Expect = 8.6 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 329 ARSAKFTSRTGRSDTGASARAERSHTRRYSPRRS 430 A+ + RT + TGA RA RSH+ +P R+ Sbjct: 4 AQGMAYKLRTDAAPTGAGRRARRSHSSVAAPYRA 37 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,209,777 Number of Sequences: 37544 Number of extensions: 343387 Number of successful extensions: 1118 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1083 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1118 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1423789920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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