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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0842
         (597 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508,199...    33   0.23 
11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204...    33   0.23 
07_03_1557 - 27699675-27699972,27700546-27700630,27700741-277008...    32   0.40 
03_02_0442 + 8529235-8529620,8529721-8529888,8529993-8530158,853...    32   0.40 
06_03_0539 + 21919115-21919313,21919474-21919582,21920595-219208...    31   0.70 
02_05_1265 - 35326506-35326773,35326944-35327109,35327194-353273...    31   0.70 
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768...    31   0.92 
03_05_0845 - 28155065-28155374,28156201-28156342,28156375-281565...    30   1.2  
03_02_0459 + 8649448-8651994                                           25   2.5  
04_04_0895 - 29168107-29168229,29168617-29170068                       29   2.8  
01_06_1428 - 37301697-37302175,37302300-37302471,37302570-373034...    29   2.8  
01_01_0267 + 2201404-2202501                                           29   2.8  
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    29   3.7  
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178           29   3.7  
01_06_0922 - 33022709-33023545                                         29   3.7  
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    28   4.9  
11_01_0066 - 536281-537196,537397-537452                               27   8.6  
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857...    27   8.6  

>12_01_0273 -
           1989058-1989349,1989730-1989837,1990315-1990508,
           1990601-1990717,1990801-1990966,1991323-1991490,
           1991734-1993052
          Length = 787

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593
           T FP EGS HTP H   +F++K
Sbjct: 467 TRFPPEGSKHTPPHQSCDFRWK 488



 Score = 31.1 bits (67), Expect = 0.70
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561
           GE   K  ++ ++M ++QLGI+HA+G  ++    DL   A  P  +   R  P   + T 
Sbjct: 419 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAFDPKEKVWTRFPPEGSKHTP 478

Query: 562 P 564
           P
Sbjct: 479 P 479


>11_01_0272 -
           2042490-2042781,2043146-2043203,2043385-2043401,
           2043572-2043765,2043858-2043974,2044059-2044224,
           2044430-2044597,2044741-2046047
          Length = 772

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593
           T FP EGS HTP H   +F++K
Sbjct: 463 TRFPPEGSKHTPPHQSCDFRWK 484



 Score = 31.1 bits (67), Expect = 0.70
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561
           GE   K  ++ ++M ++QLGI+HA+G  ++    DL   A  P  +   R  P   + T 
Sbjct: 415 GETISKGHKNYELMLNLQLGIRHAVGRQSAPASLDLKSSAFDPKEKVWTRFPPEGSKHTP 474

Query: 562 P 564
           P
Sbjct: 475 P 475


>07_03_1557 -
           27699675-27699972,27700546-27700630,27700741-27700847,
           27700942-27701135,27701252-27701368,27701466-27701631,
           27701723-27701887,27702185-27703428
          Length = 791

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593
           T FP EGS +TP H+  +FK+K
Sbjct: 441 TKFPPEGSKYTPPHNSCDFKWK 462


>03_02_0442 +
           8529235-8529620,8529721-8529888,8529993-8530158,
           8530579-8530689,8530845-8530993,8531087-8531217,
           8531322-8531421,8532060-8532366
          Length = 505

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593
           T FP EGS  TP HH  +F++K
Sbjct: 156 TRFPPEGSKFTPPHHSVDFRWK 177


>06_03_0539 +
           21919115-21919313,21919474-21919582,21920595-21920819,
           21921140-21921239,21921782-21921865,21922000-21922058,
           21922578-21922770
          Length = 322

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -1

Query: 438 RSHDLRGLYLLVCDLSALADAPVSDLPVRLVNFADRAHWADGWVVRYIFFGDRTPVAIIV 259
           R ++L  + ++V D+S        D  + +  F D     D W+ RY F G   P A ++
Sbjct: 178 RENELSNVEIIVADISKFEMERSFDRIISIEMFEDNNE--DDWITRYFFTGGTMPSANLL 235

Query: 258 L--ATDCSVA 235
           L    D S+A
Sbjct: 236 LYFQDDVSIA 245


>02_05_1265 -
           35326506-35326773,35326944-35327109,35327194-35327351,
           35327779-35327966,35328046-35328156,35328311-35328476,
           35328718-35328885,35329374-35330623
          Length = 824

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 471 PSVEARTRSTDAGFMTVETTNFPHEGSNHTPAHHYSEFKFK 593
           P  +   R++D G        FP EGS  TP+H   +FK+K
Sbjct: 425 PIQKREVRASDFGPRASFWMTFPKEGSRLTPSHPAEDFKWK 465


>12_01_0830 -
           7678038-7678444,7678996-7680943,7681231-7681983,
           7682701-7682824,7683590-7683723
          Length = 1121

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 475 ASKPERDLLMQAS*PSRRRISPTKDRTTRPPITIPSSNSKR 597
           +S+    L +Q+S PSRR  +P  ++T  PP   PS  S+R
Sbjct: 125 SSRCSPPLSLQSSTPSRRSPTPPGNKTLTPPRRSPSPASRR 165


>03_05_0845 -
           28155065-28155374,28156201-28156342,28156375-28156505,
           28156591-28156784,28156859-28156969,28157234-28157399,
           28157501-28157668,28157766-28158787
          Length = 747

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 GEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQAS*PSRR---RISPTKDRTTR 561
           G+   K  ++ ++M  +QLGI+H++G  A+ P R+L      P  +   R  P   + T 
Sbjct: 320 GQTISKGHKNYELMLQLQLGIRHSVGKSAAVPMRELSPADFDPKEKFWTRFPPEGSKVTP 379

Query: 562 P 564
           P
Sbjct: 380 P 380



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 TNFPHEGSNHTPAHHYSEFKFK 593
           T FP EGS  TP H  S+F++K
Sbjct: 368 TRFPPEGSKVTPPHSSSDFRWK 389


>03_02_0459 + 8649448-8651994
          Length = 848

 Score = 25.0 bits (52), Expect(2) = 2.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 550 DPSWGKFVVSTVMKPASVDRVR 485
           DP WG  ++ST++K    D +R
Sbjct: 751 DPDWGFGILSTLVKLEDSDHIR 772



 Score = 22.6 bits (46), Expect(2) = 2.5
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -3

Query: 370 VRSSGPTCELC*SRPLGRRLGRKVHFFRRSNSC 272
           +R    TC +C    +G R     H F   N C
Sbjct: 771 IRHGRHTCSICRYPIIGSRFKETKHSFSLCNRC 803


>04_04_0895 - 29168107-29168229,29168617-29170068
          Length = 524

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +2

Query: 188 DHIEVMESSVLKKSENATEQSVA---RTMIATGVRSPKKMYLTTQPSAQWARSAKFTS 352
           D   +M+ S+     N    SVA     +++ GV SP++M +  +    W R A +T+
Sbjct: 347 DPAGIMQQSICYDGGNRWTVSVAWGFAVLVSRGVMSPREMEMPARTFLNWYRRADYTA 404


>01_06_1428 -
           37301697-37302175,37302300-37302471,37302570-37303403,
           37303847-37304012,37304334-37304573,37304765-37304905,
           37305623-37305735,37306549-37306614,37307242-37307480,
           37307615-37307897
          Length = 910

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -2

Query: 581 LGIVMGGRVVRSFVGEIRRLDGHEACISRSRSGFDARPPIACWMPSCIDPMICEDCIFL 405
           +G  MGG+V   F     R D  E+     + G   + P+  W P   D M+C++ +++
Sbjct: 144 VGHSMGGKVALDFAESCSRGDYGESADLPKQLG---QTPLEGWFPDNYDRMLCQEILWV 199


>01_01_0267 + 2201404-2202501
          Length = 365

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +2

Query: 275 GVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASAR--AERSHTRRYSPRR 427
           G+R  + M    QP+  WAR   F      SD G   R    + H  ++ P R
Sbjct: 159 GLRRGRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLR 211


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 304 YDPAVGPMGAISKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGS 438
           Y    GP G+ S    +++ +GH  V E G I+Y +I +    GS
Sbjct: 450 YTETPGPGGSYSA---AEQNLGHLSVSEAGSISYNEISAVNEAGS 491


>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
          Length = 1143

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 206  ESSVLKKSENATE-QSVARTMIATGVRSPKKMYLTTQPSAQW-ARSAKFTSRTG 361
            E  +LK  E A +   V  T+I+ G+R        T PS +W   +A+ TSR+G
Sbjct: 949  EEQMLKVLEIACKCVKVDTTIISCGIREYHTSTNATSPSLEWEENAAQLTSRSG 1002


>01_06_0922 - 33022709-33023545
          Length = 278

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 24/79 (30%), Positives = 32/79 (40%)
 Frame = +2

Query: 185 SDHIEVMESSVLKKSENATEQSVARTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGR 364
           SD    M  +   +SE A+E SVA + +    RSP K     +P +     A   SR  R
Sbjct: 90  SDLGSCMSLATDDRSEAASESSVATSSVTGPERSPGKPARRKRPVSVSGELAHAISRRDR 149

Query: 365 SDTGASARAERSHTRRYSP 421
           +   A     RS     SP
Sbjct: 150 AAAAAYGVRSRSARASASP 168


>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 426 DHGIDTARHPARYRRPSVEARTRSTDAGFMTVETTNFPHEGSNHTPAHH 572
           DHG   +R     R+ S+E  +    + F+  +TT  P  GS  T  HH
Sbjct: 476 DHGKVRSRKNRSERQESLEPGSSGRSSDFIDQDTTESP-SGSKSTGRHH 523


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 455 WMPSCIDPMICEDCIFLYVISPPSP 381
           WM  CI P++  DC   Y  S P+P
Sbjct: 173 WMKPCIGPVLACDCEPEYFDSDPAP 197


>01_06_0276 -
           28084746-28085003,28085103-28085357,28085531-28085798,
           28085948-28086253,28086369-28086643,28087034-28087252,
           28087486-28089015,28089236-28089397,28089512-28089666,
           28090195-28091064,28091363-28091832,28091917-28091981,
           28092105-28092448,28092531-28092710,28092817-28092920,
           28093053-28093162,28093648-28093744,28094138-28094238,
           28094324-28094476,28094561-28094674,28094795-28094884,
           28094960-28095307
          Length = 2157

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 329 ARSAKFTSRTGRSDTGASARAERSHTRRYSPRRS 430
           A+   +  RT  + TGA  RA RSH+   +P R+
Sbjct: 4   AQGMAYKLRTDAAPTGAGRRARRSHSSVAAPYRA 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,209,777
Number of Sequences: 37544
Number of extensions: 343387
Number of successful extensions: 1118
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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