BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0842 (597 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005 SB_6433| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18 SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23 SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53 SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2) 29 3.8 SB_50666| Best HMM Match : ig (HMM E-Value=2.8e-20) 28 5.0 SB_54365| Best HMM Match : PI-PLC-Y (HMM E-Value=0) 28 5.0 SB_29206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 28 6.6 SB_28204| Best HMM Match : ig (HMM E-Value=5.8e-10) 28 6.6 SB_30676| Best HMM Match : DUF999 (HMM E-Value=6.7) 27 8.7 SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) 27 8.7 SB_14696| Best HMM Match : ETS_PEA3_N (HMM E-Value=8.5) 27 8.7 >SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 853 Score = 38.3 bits (85), Expect = 0.005 Identities = 25/56 (44%), Positives = 30/56 (53%) Frame = +1 Query: 340 KVHKSDRKIGHRRVGEGGEITYKKIQSSQIMGSIQLGIQHAIGGLASKPERDLLMQ 507 KV K+GHRRV E GE TYKK +G L++KPERD+LMQ Sbjct: 47 KVTTPKSKLGHRRVDEKGETTYKK-----------------VGRLSAKPERDVLMQ 85 >SB_6433| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 41 Score = 33.1 bits (72), Expect = 0.18 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +1 Query: 340 KVHKSDRKIGHRRVGEGGEITYKK 411 KV K+GHRRV E GE TYKK Sbjct: 18 KVTTPKSKLGHRRVDEKGETTYKK 41 >SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1277 Score = 32.7 bits (71), Expect = 0.23 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Frame = +2 Query: 197 EVMESSVLKKSENATEQSVARTMIATGVRSPKKMYLT---TQPSAQWARS-AKFTSRTGR 364 +V S ++S N T R+ T + + T + S+ RS + +S T R Sbjct: 1051 QVTTRSHTRRSSNTTRTHTRRSSNTTRGHTRRSSNTTRSHARRSSNTTRSHTRRSSNTTR 1110 Query: 365 SDTGASARAERSHTRRYS 418 S TG S+ RSHTRR S Sbjct: 1111 SHTGRSSNTTRSHTRRSS 1128 Score = 32.3 bits (70), Expect = 0.31 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 221 KKSENATEQSVARTMIATGV---RSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASARA 391 K+S N T + R+ T RS K++ +T + +S T RS T S+ Sbjct: 559 KRSSNTTRRHTGRSSNTTRRHTRRSSKQLAVTQDGQVTTRGHTRRSSNTTRSHTRRSSHT 618 Query: 392 ERSHTRRYS 418 R HTRR S Sbjct: 619 TRGHTRRSS 627 Score = 31.1 bits (67), Expect = 0.71 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 5/112 (4%) Frame = +2 Query: 212 SVLKKSENATEQSVARTMIATGVRSPKKMYLT---TQPSAQWARS-AKFTSRTGRSDTGA 379 S+ ++S N T R+ T + + T T+ S+ RS + +S T R T Sbjct: 697 SLTRRSSNTTRGHTRRSSNTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRSSNTTRRHTRR 756 Query: 380 SARAERSHTRRYS-PRRSWDRYS*ASSTL*EA*RRSPNAIY*CRLHDRRDDE 532 S+ R HTRR S RS R S S+T RRS N R H RR + Sbjct: 757 SSNTTRRHTRRSSNTTRSHTRRS--SNTTRGHTRRSSNT---TRSHTRRSSK 803 Score = 30.3 bits (65), Expect = 1.2 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 2/74 (2%) Frame = +2 Query: 308 TQPSAQWARS-AKFTSRTGRSDTGASARAERSHTRRYS-PRRSWDRYS*ASSTL*EA*RR 481 T+ S+ RS + +S T R T S+ RSHTRR S RS R S S+T RR Sbjct: 688 TRRSSNTTRSLTRRSSNTTRGHTRRSSNTTRSHTRRSSNTTRSLTRRS--SNTTRSHTRR 745 Query: 482 SPNAIY*CRLHDRR 523 S N R H RR Sbjct: 746 SSNT---TRRHTRR 756 >SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 418 Score = 31.5 bits (68), Expect = 0.53 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Frame = +2 Query: 47 LERILNSGDTAK-CEVNHENRYCAHKRIE*YLNTK*CKSETKMASGDSD-HIEVMESSVL 220 L R L SGD A C V H R+CAH+ I L T+ + + D H+ +++S+L Sbjct: 80 LRRTLESGDFADVCFVIHGQRFCAHRAI---LTTRSSYFASMFETKWKDKHVITLKNSLL 136 Query: 221 KKSENATEQSVARTMIATGVRSPKKMYLTTQ 313 + + V++TM + K+++ Q Sbjct: 137 LFHLDRLDVDVSQTMDVLLLAKQCKLHVLKQ 167 >SB_13250| Best HMM Match : Toxin_22 (HMM E-Value=1.2) Length = 376 Score = 28.7 bits (61), Expect = 3.8 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +1 Query: 337 SKVHKSDRKIGHRRVGEGGEITYKKIQSSQIMG 435 S HK+ +K+GHR G+G + +K + + G Sbjct: 340 SVYHKTTKKLGHRDTGKGESVYHKTRKKASTSG 372 >SB_50666| Best HMM Match : ig (HMM E-Value=2.8e-20) Length = 293 Score = 28.3 bits (60), Expect = 5.0 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = +2 Query: 233 NATEQSVARTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGA---SARAERSH 403 N TE +V ++ GV P + + + A + S GR+DTG+ +A++E H Sbjct: 14 NETESTVLSCSVSEGVAPPPSVTWSRDGQQRGAGDSLTISSAGRADTGSYRCTAKSEDLH 73 Query: 404 TRRYSP 421 + P Sbjct: 74 QQYGHP 79 >SB_54365| Best HMM Match : PI-PLC-Y (HMM E-Value=0) Length = 593 Score = 28.3 bits (60), Expect = 5.0 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Frame = +2 Query: 230 ENATEQSVARTMIATGVRSPKKMYL----TTQPSAQWARS-AKFTSRTGRSDTGASARAE 394 +N+ + S+ R + R P+++Y ++ S Q S A++T T ++ ++ R Sbjct: 39 QNSRQGSIKRQSVKVNTRKPREVYHRYPEASRGSPQIHGSLARYTPNTRKTRVYSNTRKP 98 Query: 395 RSHTRRYSPRRS 430 R H +PR++ Sbjct: 99 REHDANKNPRKT 110 >SB_29206| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 96 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -3 Query: 340 C*SRPLGRRLGRKVHFFRRSNSC--RDHRPRD 251 C +R G++ GR + R+ C R+HRPRD Sbjct: 30 CQTREYGQKTGRMRPYDRQRRGCIVRNHRPRD 61 >SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) Length = 440 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 Query: 526 RRISPTKDRTTRPPITIPSSNSKR 597 R +S +K R +R PIT SNSKR Sbjct: 392 RSLSKSKKRRSRSPITKKESNSKR 415 >SB_28204| Best HMM Match : ig (HMM E-Value=5.8e-10) Length = 189 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +2 Query: 233 NATEQSVARTMIATGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSDTGASARAERS 400 N TE +V ++ GV P + + + A + S GR+DTG+ RS Sbjct: 14 NETESTVLSCSVSEGVAPPPSVTWSRDGQQRGAGDSLTISSAGRADTGSYRCTARS 69 >SB_30676| Best HMM Match : DUF999 (HMM E-Value=6.7) Length = 310 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 581 LGIVMGGRVVRSFVGEIRRLDGHEAC 504 +G V+GGRV S V E LDG C Sbjct: 75 IGSVIGGRVTYSTVDEYDALDGELVC 100 >SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 574 Score = 27.5 bits (58), Expect = 8.7 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 272 TGVRSPKKMYLTTQPSAQWARSAKFTSRTGRSD---TGASARAERSHTRRYSPRRS 430 +G ++ L T+PS A SA T+ +GR+ T ASAR + R R S Sbjct: 205 SGDEEGRRRGLRTRPSPSTASSANETNESGRTTHARTAASARGRGNRRGRTGTRSS 260 >SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) Length = 841 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = +3 Query: 501 DAGFMTVETTNFPHEGSNHTP-AHHYSE 581 D G T TTN HE + HT +HHY + Sbjct: 454 DTGTFTRITTNPMHEPAQHTSVSHHYDD 481 >SB_14696| Best HMM Match : ETS_PEA3_N (HMM E-Value=8.5) Length = 375 Score = 27.5 bits (58), Expect = 8.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 285 RRKKCTLRPSRRPNGRDQQSSQVG 356 RR+K RPS+RP D+++S+ G Sbjct: 15 RRRKGRGRPSKRPRREDEENSEKG 38 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,626,937 Number of Sequences: 59808 Number of extensions: 397439 Number of successful extensions: 1591 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1453 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1582 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1439498375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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