Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0842
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    28   0.20 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    28   0.20 
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   3.2  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   5.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.9  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 150 HFVFKYYSILLCAQ*RFSWFTSHFAVSPLFSILSNL 43
           HF+F+Y +  +  +  +SW+T    +   F+IL NL
Sbjct: 27  HFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNL 62


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 150 HFVFKYYSILLCAQ*RFSWFTSHFAVSPLFSILSNL 43
           HF+F+Y +  +  +  +SW+T    +   F+IL NL
Sbjct: 27  HFLFRYVTGPILIRKVYSWWTLAMVLIQFFAILGNL 62


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 438 RSHDLRG-LYLLVCDLSALADAPVSDLPVRLVNFADRAHWA 319
           R H L G L LLVC L A+   PVS  P   +   +  +WA
Sbjct: 14  RRHLLTGSLLLLVCLLLAIDPTPVSADPDEDIPHNEVRNWA 54


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +3

Query: 306  RPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHGIDTARHPARYRRPSVE 482
            R S   NG  +QSS  G      A       +  +D    ++  D AR   +YRRP+VE
Sbjct: 1178 RSSATNNGGGRQSSNNG----LGAGGRTNFAYQVDDDFDDNYSDDDAREEMQYRRPTVE 1232


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +2

Query: 359 GRSDTG-ASARAERSHTRRYSPRRSWDR 439
           GR  TG     AER   RR  PRR  DR
Sbjct: 319 GRLRTGPVPGAAERHRRRRPPPRRRHDR 346


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 303  LRPSRRPNGRDQQSSQVGPEDRTPAXXXXXXDHIQEDTVLADHG 434
            L+P  RP+      S V P D  P       D ++ D     HG
Sbjct: 1158 LQPKTRPSIMLPGPSAVEPSDEMPKSLRYCKDPLKPDDETDGHG 1201


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 119 YVHNNDSHGSLRTSRYHHYS 60
           ++HN+ S G  R   +HH+S
Sbjct: 421 HLHNHRSGGGGRHHHHHHHS 440


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,785
Number of Sequences: 2352
Number of extensions: 12483
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)