Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0841
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.66 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.66 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.66 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.1  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 23  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 136
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 23  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 136
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 23  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 136
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 521  TDTSWPKRGTRGEPP 477
            T T+WP +GT   PP
Sbjct: 1075 TTTNWPTQGTTIPPP 1089


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 533 YWAGTDTSWPK 501
           YW G DT W +
Sbjct: 221 YWGGADTPWQR 231



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 506 ASWCLYRPSTCTRCPKECLPWMLLPITTNYVVAY 607
           ASW +YRP      PK   P +   I   ++  Y
Sbjct: 31  ASWAIYRPDKGEYHPKNIDPNICTHINYAFLGVY 64


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 375 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWLS-PSTALGP 509
           S +H++   ++ +N       LAK+   + + T +++    T  GP
Sbjct: 101 SFMHKKSFKNFVNNVAALDETLAKLGQYINYETDYYVCLAMTITGP 146


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 433 LDFTSAFEAQDERSLRWRVDGALTNYQILEV*AAGFHAN 317
           + F+S    +  RSL     GALT + ++     G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 123 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 154


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 572 ASRADIPSGSAYTYWAGTDTSWPKRGTRGEPP 477
           +S A   S ++ T  AGT+ +  K G    PP
Sbjct: 167 SSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,152
Number of Sequences: 336
Number of extensions: 3003
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)