Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0841
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   1.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   1.9  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    23   5.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 22/88 (25%), Positives = 35/88 (39%)
 Frame = +2

Query: 188 RGEKG*DPTAQGNARRSTYRLRGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQ 367
           R   G  P   GN+  S  +++  K  ++   P PT  E  +     + G+NF      Q
Sbjct: 102 RNGDGGRPAYSGNSDPSMDQVKTDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQ 161

Query: 368 GAIDSPPKTPFILGFECAGEIEQVGENV 451
             +        +  FE +G  E+V  NV
Sbjct: 162 VRVSGENPPDHVESFERSGLREEVMTNV 189


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
 Frame = -2

Query: 574 QHPGQTFLRAARTR-TGPVQTPAGPSAVLGESHHLVAHLK 458
           Q P   F    R   + P   P  P    GES+H   H++
Sbjct: 283 QQPSVIFSPVPRLAGSSPAAAPPSPPTSAGESNHYYGHIR 322


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 510 LAQARYSGRATTWSPTLKLV 451
           +A  RYS   TT+SP+ KLV
Sbjct: 1   MASERYSFSLTTFSPSGKLV 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,596
Number of Sequences: 2352
Number of extensions: 13317
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)