Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0841
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    54   8e-08
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    46   2e-05
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.010
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.010
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.010
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.030
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = +2

Query: 266 VKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGE 445
           ++ ++   P + + +VL+R  A G+N  D  +R G     P  P++ G + AG +E VGE
Sbjct: 24  IEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYVPGKDGAGFVELVGE 83

Query: 446 NVTNFKVGDQV 478
           +V N KVGD+V
Sbjct: 84  SVKNVKVGDRV 94


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +2

Query: 248 LRGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDL-IVRQGAIDS-PPKTPFILGFECA 421
           L G+  +++ + P    G  +VL+++   G+   D+  +  GAI S   K P +LG E +
Sbjct: 10  LYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHESS 69

Query: 422 GEIEQVGENVTNFKVGDQVVALP 490
           G + ++G  V  FKVGD++   P
Sbjct: 70  GVVSEIGSEVKGFKVGDRIAMEP 92


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 21/70 (30%), Positives = 42/70 (60%)
 Frame = +2

Query: 266 VKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGE 445
           +++ + P P+  + E+L++++  G+   DL V  G +      P + G E AG + Q+G+
Sbjct: 21  LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGK 80

Query: 446 NVTNFKVGDQ 475
           NVT +++GD+
Sbjct: 81  NVTGWQLGDK 90


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 31/86 (36%), Positives = 43/86 (50%)
 Frame = +2

Query: 257 LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQ 436
           LKTV I  KP       +VL++  A  +N  DL   QG     P  P + G E  G++  
Sbjct: 34  LKTVTIADKPSAD----QVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVIS 89

Query: 437 VGENVTNFKVGDQVVALPEYRAWASW 514
           VG NV++ KVGD V+  P+     +W
Sbjct: 90  VGSNVSSIKVGDHVI--PDRSGLGTW 113


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
 Frame = +2

Query: 248 LRGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIV-RQGAIDS-PPKTPFILGFECA 421
           L G+  +++ + P P  G  +VL++V   G+   D+     GAI     K P I+G E +
Sbjct: 10  LYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETS 69

Query: 422 GEIEQVGENVTNFKVGDQVVALP 490
           G + +VG  V + KVGD++   P
Sbjct: 70  GIVSEVGNEVKHLKVGDRIAMEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 395 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 487
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 395 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 487
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 395 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 487
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.030
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 395 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 487
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical protein
            F20G4.1 protein.
          Length = 1615

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +2

Query: 317  IRVKACGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVA 484
            I VKAC ++ + L+  +G    PP  PF L       IE   E V N K  D  +A
Sbjct: 1493 IGVKACEMSAEFLL--EGDDTRPPSNPFTLFLLMRSNIEDFLELVANKKSRDDEIA 1546


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 466 HLKIGDIFANLLDFTSAFEAQDERSLR 386
           H+ +GDI  NL  FT A E  D+R+ R
Sbjct: 426 HVYLGDITRNLEYFTKAIELSDDRNAR 452


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 561 CPGCCCPSPRTTWWP 605
           CP CCC   R+ +WP
Sbjct: 162 CPPCCCIIQRSAFWP 176


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 101 RRRDSSTGEDPDRKWCY*NTARGNARKIYRGEKG 202
           +RRD+  G++   +W + N A+   R +Y+G +G
Sbjct: 241 QRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 392 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWA--SWCL 520
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+   W L
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRIEWSL 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,382,196
Number of Sequences: 27780
Number of extensions: 280745
Number of successful extensions: 828
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)