BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0841 (608 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.1 AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 3.1 AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.4 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.4 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.4 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 22.6 bits (46), Expect = 3.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 328 SLRPKLPRFDSSSGRHRLSTEDSFHLGL 411 S+RPK P D+ +G LSTE L L Sbjct: 208 SVRPKFPSMDNING---LSTESKADLPL 232 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 22.6 bits (46), Expect = 3.1 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +3 Query: 543 AARRNVCPGCCCPSP 587 +ARRNV CCP P Sbjct: 185 SARRNVEYYSCCPEP 199 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 21.8 bits (44), Expect = 5.4 Identities = 9/24 (37%), Positives = 12/24 (50%) Frame = +3 Query: 507 PAGVCTGPVRVRAARRNVCPGCCC 578 P VC+ P V A++ V CC Sbjct: 583 PESVCSLPCEVGQAKKYVAGEQCC 606 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 21.0 bits (42), Expect = 9.4 Identities = 6/15 (40%), Positives = 8/15 (53%) Frame = +3 Query: 558 VCPGCCCPSPRTTWW 602 VC CP+P W+ Sbjct: 258 VCVAQACPTPEYRWY 272 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 21.0 bits (42), Expect = 9.4 Identities = 6/15 (40%), Positives = 8/15 (53%) Frame = +3 Query: 558 VCPGCCCPSPRTTWW 602 VC CP+P W+ Sbjct: 258 VCVAQACPTPEYRWY 272 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 161,401 Number of Sequences: 438 Number of extensions: 3491 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17971191 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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