Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0840
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70312-6|CAA94387.1|  807|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70309-14|CAA94363.1|  807|Caenorhabditis elegans Hypothetical p...    28   7.2  

>Z70312-6|CAA94387.1|  807|Caenorhabditis elegans Hypothetical
           protein ZC168.1 protein.
          Length = 807

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 566 YIYVYIYLMHNNPVPYDIWIPMVTM*ALVIKLVLAY 673
           YI+V++ L+   P   D+W  ++T+   +I +V++Y
Sbjct: 172 YIWVFLVLIVITPNVVDVWEAILTLLFFIILVVVSY 207


>Z70309-14|CAA94363.1|  807|Caenorhabditis elegans Hypothetical
           protein ZC168.1 protein.
          Length = 807

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 566 YIYVYIYLMHNNPVPYDIWIPMVTM*ALVIKLVLAY 673
           YI+V++ L+   P   D+W  ++T+   +I +V++Y
Sbjct: 172 YIWVFLVLIVITPNVVDVWEAILTLLFFIILVVVSY 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,965,225
Number of Sequences: 27780
Number of extensions: 239640
Number of successful extensions: 435
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)