BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0839 (561 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 6e-48 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 6e-48 SB_56| Best HMM Match : Actin (HMM E-Value=0) 187 6e-48 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 187 6e-48 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 187 6e-48 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 8e-16 SB_54| Best HMM Match : Actin (HMM E-Value=0) 81 8e-16 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 62 4e-10 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 5e-10 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 47 9e-06 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 36 0.017 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 34 0.069 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.069 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.64 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.64 SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.64 SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64 SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.64 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.64 SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64 SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.85 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0 SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 2.6 SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.6 SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.6 SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 2.6 SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.6 SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.6 SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 3.4 SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 4.5 SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 28 4.5 SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 6.0 SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.0 SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 28 6.0 SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 28 6.0 SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0 SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.0 SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 27 7.9 SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 187 bits (455), Expect = 6e-48 Identities = 84/90 (93%), Positives = 87/90 (96%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108 Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511 APLNPKANREKMTQIMFETFN+PAMYVAI+ Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 138 QAVLSLYASGRTTGIVMD 155 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 187 bits (455), Expect = 6e-48 Identities = 84/90 (93%), Positives = 87/90 (96%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107 Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511 APLNPKANREKMTQIMFETFN+PAMYVAI+ Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 137 QAVLSLYASGRTTGIVMD 154 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 187 bits (455), Expect = 6e-48 Identities = 84/90 (93%), Positives = 87/90 (96%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107 Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511 APLNPKANREKMTQIMFETFN+PAMYVAI+ Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 137 QAVLSLYASGRTTGIVMD 154 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 187 bits (455), Expect = 6e-48 Identities = 84/90 (93%), Positives = 87/90 (96%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108 Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511 APLNPKANREKMTQIMFETFN+PAMYVAI+ Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138 Score = 81.4 bits (192), Expect = 5e-16 Identities = 40/54 (74%), Positives = 45/54 (83%) Frame = +3 Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 MCD+ +A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 1 MCDD-DVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 138 QAVLSLYASGRTTGIVMD 155 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 187 bits (455), Expect = 6e-48 Identities = 84/90 (93%), Positives = 87/90 (96%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108 Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511 APLNPKANREKMTQIMFETFN+PAMYVAI+ Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 138 QAVLSLYASGRTTGIVMD 155 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 95.1 bits (226), Expect = 3e-20 Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%) Frame = +2 Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNP 436 VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP Sbjct: 57 VGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNP 116 Query: 437 KANREKMTQIMFETFNTPAMYVAIK 511 NREKM ++MFE + +Y+AI+ Sbjct: 117 MKNREKMIEVMFENYQFEGVYIAIQ 141 Score = 33.1 bits (72), Expect = 0.16 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = +3 Query: 153 KAGFAGNDAPRAVFPSIVGRP--RHQGVMVGMGQKDLM 260 K G+AG++ P +FPS+VGRP R + + KDLM Sbjct: 19 KCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLM 56 Score = 29.1 bits (62), Expect = 2.6 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVL+LYA G TG+V+D Sbjct: 141 QAVLTLYAQGLLTGVVID 158 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 80.6 bits (190), Expect = 8e-16 Identities = 36/43 (83%), Positives = 37/43 (86%) Frame = +2 Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 370 G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 79.0 bits (186), Expect = 2e-15 Identities = 34/36 (94%), Positives = 36/36 (100%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254 +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD Sbjct: 16 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51 Score = 37.5 bits (83), Expect = 0.007 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +2 Query: 443 NREKMTQIMFETFNTPAMYVAIK 511 N + M +IMFETFN+PAMYVAI+ Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQ 100 Score = 37.5 bits (83), Expect = 0.007 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTGIV+D Sbjct: 100 QAVLSLYASGRTTGIVMD 117 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 80.6 bits (190), Expect = 8e-16 Identities = 35/54 (64%), Positives = 44/54 (81%) Frame = +2 Query: 350 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA++ Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182 Score = 43.2 bits (97), Expect = 1e-04 Identities = 16/25 (64%), Positives = 22/25 (88%) Frame = +3 Query: 150 CKAGFAGNDAPRAVFPSIVGRPRHQ 224 CKAG + +++PR VFP+IVGRPRH+ Sbjct: 2106 CKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 32.7 bits (71), Expect = 0.21 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAV++LYASGRTTG V D Sbjct: 2182 QAVMALYASGRTTGTVFD 2199 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 61.7 bits (143), Expect = 4e-10 Identities = 23/38 (60%), Positives = 33/38 (86%) Frame = +2 Query: 398 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511 +HPVLLTEAPLNP+ NREK ++ FETFN PA++++++ Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163 Score = 36.7 bits (81), Expect = 0.013 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYA+GRTTG+VLD Sbjct: 163 QAVLSLYATGRTTGVVLD 180 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 61.3 bits (142), Expect = 5e-10 Identities = 24/65 (36%), Positives = 42/65 (64%) Frame = +2 Query: 308 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 487 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 488 PAMYV 502 PA ++ Sbjct: 63 PAFFL 67 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 53.6 bits (123), Expect = 1e-07 Identities = 24/53 (45%), Positives = 31/53 (58%) Frame = +2 Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 415 ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 285 FIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 47.2 bits (107), Expect = 9e-06 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = +3 Query: 153 KAGFAGNDAPRAVFPSIVGRPRHQ 224 K GFAG+DAP+ VFP IVGRPRHQ Sbjct: 1369 KVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 36.3 bits (80), Expect = 0.017 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Frame = +2 Query: 224 GRDGRYGTEGPYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 394 GR G + G VG++ S I L+ P + +VT+++ E++ H F + P Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164 Query: 395 EEHPVLLTEAPLNPKANRE 451 HPV++TE NP R+ Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 36.3 bits (80), Expect = 0.017 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLD 561 QAVLSLYASGRTTG+V D Sbjct: 16 QAVLSLYASGRTTGVVFD 33 Score = 30.3 bits (65), Expect = 1.1 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +2 Query: 464 IMFETFNTPAMYVAIK 511 IMFE FN+PA+YVAI+ Sbjct: 1 IMFEAFNSPAVYVAIQ 16 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 34.3 bits (75), Expect = 0.069 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 147 LCKAGFAGNDAPRAVFPSIVGRPRHQGVMVG 239 + K GFAG+ PR + P++VG P+ +++G Sbjct: 711 ISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 34.3 bits (75), Expect = 0.069 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 257 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 379 ++GD+ + + L Y P + G + NWD ++IW +TF E Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 451 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 314 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 292 >SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 885 Score = 31.1 bits (67), Expect = 0.64 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = -2 Query: 269 HLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAQY 144 H++ K ++SH +HH ++ + +HG R + SCE+ L ++ Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQLIEF 506 >SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 134 >SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 402 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 134 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 256 >SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 31.1 bits (67), Expect = 0.64 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H M D +HG RS SCET L Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 168 >SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) Length = 570 Score = 30.7 bits (66), Expect = 0.85 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H M D +HG RS SCET L Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQL 216 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -2 Query: 221 MAGPSHDRGEHGARSIISCETGLA 150 MA + D GE+G+ SI+S ETGLA Sbjct: 1 MARSADDGGENGSGSIVSGETGLA 24 >SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) Length = 419 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 285 >SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 146 >SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2396 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 1684 >SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 859 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 712 >SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) Length = 329 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 267 >SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) Length = 1492 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 1122 >SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) Length = 452 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 65 >SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ ++LSH + H L A +HG R +SCET L Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQL 146 >SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) Length = 635 Score = 28.7 bits (61), Expect = 3.4 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 182 SRRVPLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNW--DDMEKI 355 SR V L + +GR+ G G V + K ++TL + I G+ + D EK+ Sbjct: 438 SRPVTLSQNVVSVTGRE-ESGGSGTQV---CRKKAPLITLSHVIRMGLALSLVSDVKEKV 493 Query: 356 WHHTFYN 376 W+HT N Sbjct: 494 WYHTCPN 500 >SB_23305| Best HMM Match : RVT_1 (HMM E-Value=0.0013) Length = 808 Score = 28.3 bits (60), Expect = 4.5 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1 Query: 540 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 382 T G VQR GL+ + + N S +F L+ G R S S G S AT+ Sbjct: 275 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 326 >SB_17130| Best HMM Match : RVT_1 (HMM E-Value=0.0013) Length = 994 Score = 28.3 bits (60), Expect = 4.5 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1 Query: 540 TTGRVQREHGLMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATR 382 T G VQR GL+ + + N S +F L+ G R S S G S AT+ Sbjct: 832 TVGEVQRLLGLLGYHRQYIANFSKTAKCLFQLIQ-GPRDKSSSSKGGPSSATK 883 >SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) Length = 209 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 136 >SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 522 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 136 >SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) Length = 221 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 169 >SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) Length = 224 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 86 >SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1676 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 758 >SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 1176 Score = 27.9 bits (59), Expect = 6.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 287 LFCSVPHLLHKVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 153 L C ++ V+LSH + H L A +HG R+ SCET L Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 842 >SB_36009| Best HMM Match : Collagen (HMM E-Value=0) Length = 687 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 Query: 206 GKAPPSGRDGRYGTEGP 256 G+A PSGR+G GT GP Sbjct: 163 GEAGPSGRNGANGTAGP 179 >SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 251 Score = 27.5 bits (58), Expect = 7.9 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 Query: 182 SRRVPLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289 SR P DRG P G G G +G D + +RG Sbjct: 6 SRGTPGDRGPRGPPGEQGFSGVKGKEGRDGVKGERG 41 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,972,969 Number of Sequences: 59808 Number of extensions: 484048 Number of successful extensions: 1462 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 1255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1456 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1312894764 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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