Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0839
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 188 2e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 188 2e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 188 2e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 188 2e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 188 2e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 188 2e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 188 2e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 188 2e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 188 2e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 188 2e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 184 3e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 121 4e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 8e-21
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 82 2e-16
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 82 2e-16
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 81 4e-16
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 81 4e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.007
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.007
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 29 3.0
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.0
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.0
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.0
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.0
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 28 5.3
Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical pr... 27 7.0
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 27 7.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 27 9.2
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 27 9.2
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 27 9.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ +A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-DVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTGIVLD
Sbjct: 138 QAVLSLYASGRTTGIVLD 155
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ +A +++ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-DVAALILDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTGIVLD
Sbjct: 138 QAVLSLYASGRTTGIVLD 155
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 94 QAVLSLYASGRTTGVVLD 111
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3
Query: 153 KAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
+AGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 38
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 124 QAVLSLYASGRTTGVVLD 141
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 188 bits (459), Expect = 2e-48
Identities = 85/90 (94%), Positives = 87/90 (96%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPKANREKMTQIMFETFNTPAMYVAI+
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTG+VLD
Sbjct: 138 QAVLSLYASGRTTGVVLD 155
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 184 bits (449), Expect = 3e-47
Identities = 82/90 (91%), Positives = 86/90 (95%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 421
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 422 APLNPKANREKMTQIMFETFNTPAMYVAIK 511
APLNPK+NREKMTQIMFETFNTPAMYV I+
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Score = 80.2 bits (189), Expect = 9e-16
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +3
Query: 102 ERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
E ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 2 EEEIAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 51
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYASGRTTGIVLD
Sbjct: 137 QAVLSLYASGRTTGIVLD 154
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 121 bits (291), Expect = 4e-28
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Frame = +2
Query: 242 GTEGP-YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 415
G +G ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 416 TEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
T+APLNP NRE+ +I FETFN PA+Y+ ++
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQ 141
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 153 KAGFAGNDAPRAVFPSIVGRPRHQGVMVG 239
KAGFAG P+ F + VGRP++ VM G
Sbjct: 21 KAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVLSLYA+GRTTG+VLD
Sbjct: 141 QAVLSLYATGRTTGVVLD 158
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.1 bits (231), Expect = 8e-21
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 433
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 434 PKANREKMTQIMFETFNTPAMYVAIK 511
NRE +IMFE+FN P +Y+A++
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQ 151
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNP 436
VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP
Sbjct: 57 VGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNP 116
Query: 437 KANREKMTQIMFETFNTPAMYVAIK 511
+NREKM Q+MFE + ++YVA++
Sbjct: 117 NSNREKMFQVMFEQYGFNSIYVAVQ 141
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 153 KAGFAGNDAPRAVFPSIVGRP 215
K G+AG + P +FPS+VGRP
Sbjct: 19 KCGYAGTNFPAHIFPSMVGRP 39
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLD 561
QAVL+LYA G TG+V+D
Sbjct: 141 QAVLTLYAQGLLTGVVVD 158
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 9e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ ++A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-EVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 9e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ +A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-DVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 77.0 bits (181), Expect = 9e-15
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 355
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 81.4 bits (192), Expect = 4e-16
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +3
Query: 93 MCDERKLAGWVVEQWLPVLCKAGFAGNDAPRAVFPSIVGRPRHQGVMVGMGQKD 254
MCD+ +A VV+ +CKAGFAG+DAPRAVFPSIVGRPRHQGVMVGMGQKD
Sbjct: 1 MCDD-DVAALVVDNGSG-MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD 52
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 242 GTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 346
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +2
Query: 311 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 490
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 491 AMYVA 505
A Y++
Sbjct: 154 AYYLS 158
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 445
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 446 REKMTQIMFETF 481
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 266 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 445
+E K + ++ PIE G V NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPAL 106
Query: 446 REKMTQIMFETF 481
+ ++I+F+ F
Sbjct: 107 PDVSSEILFDYF 118
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 203 RGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -1
Query: 360 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPT*GPSVPYRPSRPDG 217
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 153 KAGFAGNDAPRAVFPSIVGRPRHQG 227
KA + G+D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 507
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 472 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 501
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 194 PLDRGKAPPSGRDGRYGTEGPYVGDEAQSKRG 289
P RG P GRDGR +GP G +Q RG
Sbjct: 537 PGRRGSGGPEGRDGR--GQGPDFGPGSQGGRG 566
>Z68119-6|CAE17916.1| 181|Caenorhabditis elegans Hypothetical
protein T18D3.9 protein.
Length = 181
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 332 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIK 511
+WD +++ W + + L+V P V L PLN R + Q++ +N Y+ K
Sbjct: 116 SWDLLKEDWFNIYATSLKVWPFVQVVNLCFVPLN---YRVILNQVVAFFWNCYLSYITQK 172
Query: 512 P 514
P
Sbjct: 173 P 173
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 206 GKAPPSGRDGRYGTEGPYVGDEAQS 280
G+A P+GRDG G +GP +G + S
Sbjct: 206 GEAGPNGRDGTRGQKGP-IGPKGDS 229
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 406
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 406
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 185 RRVPLDRGKAPPSG--RDGRYGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 358
R V + RGK G G+ T +V E S G+L Y + + N DM+
Sbjct: 94 RTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNET 149
Query: 359 HHTFYNELRVAPEEHPVLLTEAPLNPKANRE 451
N +R A EE + + + P PK++R+
Sbjct: 150 KDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 185 RRVPLDRGKAPPSG--RDGRYGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 358
R V + RGK G G+ T +V E S G+L Y + + N DM+
Sbjct: 94 RTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNET 149
Query: 359 HHTFYNELRVAPEEHPVLLTEAPLNPKANRE 451
N +R A EE + + + P PK++R+
Sbjct: 150 KDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 185 RRVPLDRGKAPPSG--RDGRYGTEGPYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 358
R V + RGK G G+ T +V E S G+L Y + + N DM+
Sbjct: 133 RTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPSD-GLL---YANDQILEVNGLDMQNET 188
Query: 359 HHTFYNELRVAPEEHPVLLTEAPLNPKANRE 451
N +R A EE + + + P PK++R+
Sbjct: 189 KDNVVNAVRAAKEELQITVQQLPQRPKSSRK 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,213,585
Number of Sequences: 27780
Number of extensions: 331036
Number of successful extensions: 1287
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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