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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0838
         (395 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0215 + 13524418-13524465,13524856-13525171,13525291-135253...    31   0.34 
07_03_1055 - 23612968-23613038,23614625-23614763,23614854-236150...    30   0.59 
08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058...    29   1.0  
09_03_0003 + 11396076-11396386,11398803-11398869,11399194-113996...    29   1.8  
01_05_0416 + 21956050-21956512,21958001-21958065,21958772-219589...    29   1.8  
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162...    28   3.1  
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667...    27   5.5  
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247     27   5.5  
06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338     27   7.2  
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919...    27   7.2  
04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514...    27   7.2  
04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954...    27   7.2  
03_01_0150 + 1191410-1191697,1191818-1191941,1192063-1192121,119...    27   7.2  
02_02_0655 - 12679230-12679676                                         27   7.2  
01_06_0181 - 27262425-27263337,27263452-27263633                       27   7.2  
12_02_0306 + 17307166-17309091                                         26   9.6  
09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185     26   9.6  
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874     26   9.6  

>09_03_0215 +
           13524418-13524465,13524856-13525171,13525291-13525352,
           13526352-13527063,13527847-13527863
          Length = 384

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 352 GQGSGPVRDGL*VRLSHSDSSSLLICQARPGLVSGSTSPSGVMHGPADG 206
           G G+G V DGL      +D   L++ Q   G+  G  +P+G   G ADG
Sbjct: 238 GLGAGGVEDGLVEEGPGADELVLVVLQHVVGVGRGGGAPAGRDEGAADG 286


>07_03_1055 -
           23612968-23613038,23614625-23614763,23614854-23615021,
           23615341-23616045,23616647-23616847
          Length = 427

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 389 PDVASSAGFPPRWTGVR-SRSGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFRSHARSS 213
           PD  S + F  RW GVR  R+   L P Q  +Q   ID   ++++S+    +F+ H+R +
Sbjct: 87  PDWCSGSNFKHRWGGVRFKRTMLQLEPDQ--KQF-IIDNDFESFLSL---SNFKVHSRLA 140

Query: 212 RW 207
            W
Sbjct: 141 EW 142


>08_02_0417 -
           16904476-16904662,16904846-16905029,16905150-16905897,
           16906003-16906227,16906318-16906485,16906803-16907453
          Length = 720

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 389 PDVASSAGFPPRWTGVR-SRSGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFRSHARSS 213
           PD  S + F  RW GVR  R+   L P Q   +   ID   ++++S+    +F+ H+R +
Sbjct: 2   PDWCSGSNFKHRWGGVRFKRTMLELKPDQ---KKFIIDNGFESFLSL---SNFKVHSRLA 55

Query: 212 RW 207
            W
Sbjct: 56  EW 57


>09_03_0003 +
           11396076-11396386,11398803-11398869,11399194-11399698,
           11400903-11401038,11401186-11401257,11401891-11401923,
           11401924-11402047,11402387-11402437,11403437-11403563,
           11404230-11404298,11404369-11404486,11404755-11405151
          Length = 669

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 226 MHGPADGRGNDKLNDPYTQNSHTNLN 149
           MHG  DG+GND ++ P   + H  L+
Sbjct: 1   MHGNYDGKGNDLVSSPLVFDVHMGLH 26


>01_05_0416 +
           21956050-21956512,21958001-21958065,21958772-21958933,
           21959006-21959107
          Length = 263

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = +3

Query: 309 RRTQRPSRTGPDPCPPRRKTSA*SNVRPT 395
           RRT  PSRT   P PP+  T A S  RPT
Sbjct: 48  RRTGPPSRTNTSPQPPKDST-ARSGRRPT 75


>02_05_0710 -
           31115116-31115214,31115747-31115851,31116210-31116260,
           31116393-31116494,31116651-31116883,31117306-31117497,
           31118142-31118322,31118424-31118623,31119105-31119645
          Length = 567

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
 Frame = -1

Query: 389 PDVASSAGFPPRWTGVRSR-------SGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFR 231
           PD+  + G  P   GVR R           L PS      + ID+++   V  R  E   
Sbjct: 322 PDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIG 381

Query: 230 -SHARSSRWPGERQIK*SLHPKFTHKFERRL 141
            S+  S ++ GE+ +   L     H+F+ +L
Sbjct: 382 FSYLVSQKYTGEKALVKVLRNSKVHEFKIKL 412


>07_03_1566 +
           27766336-27766393,27766480-27766609,27766728-27766797,
           27767134-27767196,27767741-27767815,27768035-27768154,
           27768508-27768549,27768651-27768725,27768909-27769055,
           27769165-27769302,27769448-27769562,27769658-27769746,
           27770062-27770184
          Length = 414

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +1

Query: 148 RSNLCVNFGCRDHLICRSPGHLLDRA*LLKDSCYRILTQVLLDKSID 288
           R++  ++   R H++  +PG LLD     K   +  L  ++LD++ D
Sbjct: 93  RTSQTISLAKRPHVVVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADD 139


>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
          Length = 974

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 148 GDCNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 23
           G+ N H A N +    + YR L  FYS S +  A   VI L+
Sbjct: 854 GNSNDHAAGNPVMHDKKRYRYLIFFYSNSTSFVASIVVIILL 895


>06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338
          Length = 740

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 148 GDCNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 23
           G+ N H A + +    R YR L  FYS S +  A   VI L+
Sbjct: 615 GNSNGHAAGDPVMHDNRRYRYLIFFYSNSFSFMASIVVIILL 656


>05_04_0369 -
           20691100-20691235,20691318-20691488,20691540-20691940,
           20692084-20692452,20692540-20692986,20693065-20693772
          Length = 743

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 306 LRRTQRPSRTGPDPCPPRRKTSA 374
           +R T RP+ T P  CPP+R  SA
Sbjct: 472 IRVTARPT-TAPGGCPPKRPASA 493


>04_03_0365 -
           14950398-14950880,14950967-14951262,14951277-14951413,
           14951562-14952039,14952203-14952215
          Length = 468

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 306 LRRTQRPSRTGPDPCPPRRKTSA 374
           +R T RP+ T P  CPP+R  SA
Sbjct: 395 IRVTARPT-TAPGGCPPKRPASA 416


>04_03_0103 +
           11288977-11290353,11291962-11292075,11294987-11295436,
           11295813-11295910,11296023-11296206,11296979-11297068,
           11301608-11301727,11301812-11302054,11302715-11302988,
           11303237-11303357,11303591-11303849
          Length = 1109

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 279 INRLELSEWLRRTQRPSRTGPDPCPPRR 362
           ++ LEL E  +   +  R G DP PPRR
Sbjct: 116 VHSLELDEPEKSVVKSWRKGADPLPPRR 143


>03_01_0150 +
           1191410-1191697,1191818-1191941,1192063-1192121,
           1192565-1192629,1192838-1192931,1193005-1193085,
           1193176-1193287,1193949-1194036,1194440-1194561,
           1194636-1194973,1195579-1195870,1195946-1196016,
           1197741-1197849,1198760-1198803,1198804-1198847,
           1200431-1200524
          Length = 674

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 178 RDHLICRSPGHLLDRA*LLKDSCYRILTQVLLDKSIDSSCRN 303
           R   I   P H  D   LL+D+C  I + VL DKS     RN
Sbjct: 304 RKREISSEPNHPAD---LLRDTCQIISSDVLKDKSESVDSRN 342


>02_02_0655 - 12679230-12679676
          Length = 148

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 383 VASSAGFPPRWTGVRSRSGWSLSPSQPFRQLESI 282
           VAS++G  P W    S+S   +    PFR+ +S+
Sbjct: 10  VASASGRSPSWGSAISQSFRQVEAEDPFRRAQSM 43


>01_06_0181 - 27262425-27263337,27263452-27263633
          Length = 364

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
 Frame = +3

Query: 288 LELSEWLRRTQRP-----SRTGPDPCP-PRRK 365
           +EL+ WL+   RP       T P PCP PRRK
Sbjct: 258 IELNPWLKDILRPFPPPLPPTPPPPCPSPRRK 289


>12_02_0306 + 17307166-17309091
          Length = 641

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 361 LLGGQGSGPVRDGL*VRLSHSDS-SSLLICQARPGLVSGSTSPSGVMHGPADGRG 200
           L GG   G  RDG+ VRL+   + +   +  +  G+  G+    G   G  DG G
Sbjct: 123 LCGGGARGGARDGVGVRLTGGGAGAGAGVGSSLAGVGGGTLCGGGARGGARDGGG 177


>09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185
          Length = 248

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 286 DSSCRNG*DGLRDHPERDRTPVHRGGKPAL 375
           DS C    +G++  P R RT + R GKP +
Sbjct: 202 DSPCCESSNGIKTSPLRARTHMLRWGKPLM 231


>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
          Length = 488

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 300 EWLRRTQRPSRTGPDPCPP 356
           E LR   RP+ T PDP PP
Sbjct: 158 EELRFHYRPNMTAPDPLPP 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,496,925
Number of Sequences: 37544
Number of extensions: 254567
Number of successful extensions: 774
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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