BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0838 (395 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_03_0215 + 13524418-13524465,13524856-13525171,13525291-135253... 31 0.34 07_03_1055 - 23612968-23613038,23614625-23614763,23614854-236150... 30 0.59 08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 29 1.0 09_03_0003 + 11396076-11396386,11398803-11398869,11399194-113996... 29 1.8 01_05_0416 + 21956050-21956512,21958001-21958065,21958772-219589... 29 1.8 02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162... 28 3.1 07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 27 5.5 06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 27 5.5 06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338 27 7.2 05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 27 7.2 04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514... 27 7.2 04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954... 27 7.2 03_01_0150 + 1191410-1191697,1191818-1191941,1192063-1192121,119... 27 7.2 02_02_0655 - 12679230-12679676 27 7.2 01_06_0181 - 27262425-27263337,27263452-27263633 27 7.2 12_02_0306 + 17307166-17309091 26 9.6 09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185 26 9.6 07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 26 9.6 >09_03_0215 + 13524418-13524465,13524856-13525171,13525291-13525352, 13526352-13527063,13527847-13527863 Length = 384 Score = 31.1 bits (67), Expect = 0.34 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -2 Query: 352 GQGSGPVRDGL*VRLSHSDSSSLLICQARPGLVSGSTSPSGVMHGPADG 206 G G+G V DGL +D L++ Q G+ G +P+G G ADG Sbjct: 238 GLGAGGVEDGLVEEGPGADELVLVVLQHVVGVGRGGGAPAGRDEGAADG 286 >07_03_1055 - 23612968-23613038,23614625-23614763,23614854-23615021, 23615341-23616045,23616647-23616847 Length = 427 Score = 30.3 bits (65), Expect = 0.59 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 389 PDVASSAGFPPRWTGVR-SRSGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFRSHARSS 213 PD S + F RW GVR R+ L P Q +Q ID ++++S+ +F+ H+R + Sbjct: 87 PDWCSGSNFKHRWGGVRFKRTMLQLEPDQ--KQF-IIDNDFESFLSL---SNFKVHSRLA 140 Query: 212 RW 207 W Sbjct: 141 EW 142 >08_02_0417 - 16904476-16904662,16904846-16905029,16905150-16905897, 16906003-16906227,16906318-16906485,16906803-16907453 Length = 720 Score = 29.5 bits (63), Expect = 1.0 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -1 Query: 389 PDVASSAGFPPRWTGVR-SRSGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFRSHARSS 213 PD S + F RW GVR R+ L P Q + ID ++++S+ +F+ H+R + Sbjct: 2 PDWCSGSNFKHRWGGVRFKRTMLELKPDQ---KKFIIDNGFESFLSL---SNFKVHSRLA 55 Query: 212 RW 207 W Sbjct: 56 EW 57 >09_03_0003 + 11396076-11396386,11398803-11398869,11399194-11399698, 11400903-11401038,11401186-11401257,11401891-11401923, 11401924-11402047,11402387-11402437,11403437-11403563, 11404230-11404298,11404369-11404486,11404755-11405151 Length = 669 Score = 28.7 bits (61), Expect = 1.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 226 MHGPADGRGNDKLNDPYTQNSHTNLN 149 MHG DG+GND ++ P + H L+ Sbjct: 1 MHGNYDGKGNDLVSSPLVFDVHMGLH 26 >01_05_0416 + 21956050-21956512,21958001-21958065,21958772-21958933, 21959006-21959107 Length = 263 Score = 28.7 bits (61), Expect = 1.8 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = +3 Query: 309 RRTQRPSRTGPDPCPPRRKTSA*SNVRPT 395 RRT PSRT P PP+ T A S RPT Sbjct: 48 RRTGPPSRTNTSPQPPKDST-ARSGRRPT 75 >02_05_0710 - 31115116-31115214,31115747-31115851,31116210-31116260, 31116393-31116494,31116651-31116883,31117306-31117497, 31118142-31118322,31118424-31118623,31119105-31119645 Length = 567 Score = 27.9 bits (59), Expect = 3.1 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 8/91 (8%) Frame = -1 Query: 389 PDVASSAGFPPRWTGVRSR-------SGWSLSPSQPFRQLESIDLSSKTWVSIR*HESFR 231 PD+ + G P GVR R L PS + ID+++ V R E Sbjct: 322 PDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIG 381 Query: 230 -SHARSSRWPGERQIK*SLHPKFTHKFERRL 141 S+ S ++ GE+ + L H+F+ +L Sbjct: 382 FSYLVSQKYTGEKALVKVLRNSKVHEFKIKL 412 >07_03_1566 + 27766336-27766393,27766480-27766609,27766728-27766797, 27767134-27767196,27767741-27767815,27768035-27768154, 27768508-27768549,27768651-27768725,27768909-27769055, 27769165-27769302,27769448-27769562,27769658-27769746, 27770062-27770184 Length = 414 Score = 27.1 bits (57), Expect = 5.5 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = +1 Query: 148 RSNLCVNFGCRDHLICRSPGHLLDRA*LLKDSCYRILTQVLLDKSID 288 R++ ++ R H++ +PG LLD K + L ++LD++ D Sbjct: 93 RTSQTISLAKRPHVVVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADD 139 >06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 Length = 974 Score = 27.1 bits (57), Expect = 5.5 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 Query: 148 GDCNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 23 G+ N H A N + + YR L FYS S + A VI L+ Sbjct: 854 GNSNDHAAGNPVMHDKKRYRYLIFFYSNSTSFVASIVVIILL 895 >06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338 Length = 740 Score = 26.6 bits (56), Expect = 7.2 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -2 Query: 148 GDCNRH*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVISLI 23 G+ N H A + + R YR L FYS S + A VI L+ Sbjct: 615 GNSNGHAAGDPVMHDNRRYRYLIFFYSNSFSFMASIVVIILL 656 >05_04_0369 - 20691100-20691235,20691318-20691488,20691540-20691940, 20692084-20692452,20692540-20692986,20693065-20693772 Length = 743 Score = 26.6 bits (56), Expect = 7.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 306 LRRTQRPSRTGPDPCPPRRKTSA 374 +R T RP+ T P CPP+R SA Sbjct: 472 IRVTARPT-TAPGGCPPKRPASA 493 >04_03_0365 - 14950398-14950880,14950967-14951262,14951277-14951413, 14951562-14952039,14952203-14952215 Length = 468 Score = 26.6 bits (56), Expect = 7.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 306 LRRTQRPSRTGPDPCPPRRKTSA 374 +R T RP+ T P CPP+R SA Sbjct: 395 IRVTARPT-TAPGGCPPKRPASA 416 >04_03_0103 + 11288977-11290353,11291962-11292075,11294987-11295436, 11295813-11295910,11296023-11296206,11296979-11297068, 11301608-11301727,11301812-11302054,11302715-11302988, 11303237-11303357,11303591-11303849 Length = 1109 Score = 26.6 bits (56), Expect = 7.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 279 INRLELSEWLRRTQRPSRTGPDPCPPRR 362 ++ LEL E + + R G DP PPRR Sbjct: 116 VHSLELDEPEKSVVKSWRKGADPLPPRR 143 >03_01_0150 + 1191410-1191697,1191818-1191941,1192063-1192121, 1192565-1192629,1192838-1192931,1193005-1193085, 1193176-1193287,1193949-1194036,1194440-1194561, 1194636-1194973,1195579-1195870,1195946-1196016, 1197741-1197849,1198760-1198803,1198804-1198847, 1200431-1200524 Length = 674 Score = 26.6 bits (56), Expect = 7.2 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 178 RDHLICRSPGHLLDRA*LLKDSCYRILTQVLLDKSIDSSCRN 303 R I P H D LL+D+C I + VL DKS RN Sbjct: 304 RKREISSEPNHPAD---LLRDTCQIISSDVLKDKSESVDSRN 342 >02_02_0655 - 12679230-12679676 Length = 148 Score = 26.6 bits (56), Expect = 7.2 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -1 Query: 383 VASSAGFPPRWTGVRSRSGWSLSPSQPFRQLESI 282 VAS++G P W S+S + PFR+ +S+ Sbjct: 10 VASASGRSPSWGSAISQSFRQVEAEDPFRRAQSM 43 >01_06_0181 - 27262425-27263337,27263452-27263633 Length = 364 Score = 26.6 bits (56), Expect = 7.2 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 6/32 (18%) Frame = +3 Query: 288 LELSEWLRRTQRP-----SRTGPDPCP-PRRK 365 +EL+ WL+ RP T P PCP PRRK Sbjct: 258 IELNPWLKDILRPFPPPLPPTPPPPCPSPRRK 289 >12_02_0306 + 17307166-17309091 Length = 641 Score = 26.2 bits (55), Expect = 9.6 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 361 LLGGQGSGPVRDGL*VRLSHSDS-SSLLICQARPGLVSGSTSPSGVMHGPADGRG 200 L GG G RDG+ VRL+ + + + + G+ G+ G G DG G Sbjct: 123 LCGGGARGGARDGVGVRLTGGGAGAGAGVGSSLAGVGGGTLCGGGARGGARDGGG 177 >09_04_0667 - 19323771-19323858,19324022-19324076,19324582-19325185 Length = 248 Score = 26.2 bits (55), Expect = 9.6 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 286 DSSCRNG*DGLRDHPERDRTPVHRGGKPAL 375 DS C +G++ P R RT + R GKP + Sbjct: 202 DSPCCESSNGIKTSPLRARTHMLRWGKPLM 231 >07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 Length = 488 Score = 26.2 bits (55), Expect = 9.6 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 300 EWLRRTQRPSRTGPDPCPP 356 E LR RP+ T PDP PP Sbjct: 158 EELRFHYRPNMTAPDPLPP 176 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,496,925 Number of Sequences: 37544 Number of extensions: 254567 Number of successful extensions: 774 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 774 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 684860244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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