Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0838
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2...    29   4.2  
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.     29   4.2  
BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.         28   9.7  
BC041103-1|AAH41103.1|  160|Homo sapiens similar to RIKEN cDNA A...    28   9.7  
AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens ...    28   9.7  
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ...    28   9.7  
AK095913-1|BAC04645.1|  160|Homo sapiens protein ( Homo sapiens ...    28   9.7  
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro...    28   9.7  
AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.     28   9.7  

>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
           alpha-2-macroglobulin domain containing 8 protein.
          Length = 1885

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 335 RSGWSLSPSQPFRQLESIDLSSKTWVS 255
           RSG+ L+P+Q F++LE  D+S    VS
Sbjct: 627 RSGFRLTPAQVFQELEDYDVSDSFGVS 653


>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
          Length = 1884

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 335 RSGWSLSPSQPFRQLESIDLSSKTWVS 255
           RSG+ L+P+Q F++LE  D+S    VS
Sbjct: 626 RSGFRLTPAQVFQELEDYDVSDSFGVS 652


>BC050336-1|AAH50336.1| 1553|Homo sapiens FRYL protein protein.
          Length = 1553

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 265  PGLVSGSTSPSGVMHGPADGRGNDKLNDPYTQNSHTNLN 149
            P + SG+TS S  M  P DG  ++K      + S+ +L+
Sbjct: 1474 PSVTSGTTSSSNTMVAPTDGNPDNKPIKENIEESYVHLD 1512


>BC041103-1|AAH41103.1|  160|Homo sapiens similar to RIKEN cDNA
           A530016L24 gene protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +3

Query: 228 TPEGLVLPDTNPGLA*QINRLELSEWLRRTQRPSRTGPDPCPP 356
           T  G V PD+ P    Q  + E + W  R  R  R     CPP
Sbjct: 3   TAAGAVSPDSRPETRRQTRKNEEAAWGPRVCRAEREDNRKCPP 45


>AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46702 fis, clone TRACH3014183. ).
          Length = 1433

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 265 PGLVSGSTSPSGVMHGPADGRGNDKLNDPYTQNSHTNLN 149
           P + SG+TS S  M  P DG  ++K      + S+ +L+
Sbjct: 305 PSVTSGTTSSSNTMVAPTDGNPDNKPIKENIEESYVHLD 343


>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44709 fis, clone BRACE3019570, highly  similar
           to Rattus norvegicus SNAP-25-interacting protein (SNIP).
           ).
          Length = 1012

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 PRPSAGPCMTPEGL-VLPDTNPGLA*QINRLELSEWLRRTQRPSRTGPDPCPPRR 362
           P P   P   P G    P T P      + L +  +  RT++PS++ P P PPRR
Sbjct: 832 PTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRY--RTEKPSKSPPPP-PPRR 883


>AK095913-1|BAC04645.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38594 fis, clone HEART2000541. ).
          Length = 160

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +3

Query: 228 TPEGLVLPDTNPGLA*QINRLELSEWLRRTQRPSRTGPDPCPP 356
           T  G V PD+ P    Q  + E + W  R  R  R     CPP
Sbjct: 3   TAAGAVSPDSRPETRRQTRKNEEAAWGPRVCRAEREDNRKCPP 45


>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
            protein.
          Length = 1183

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201  PRPSAGPCMTPEGL-VLPDTNPGLA*QINRLELSEWLRRTQRPSRTGPDPCPPRR 362
            P P   P   P G    P T P      + L +  +  RT++PS++ P P PPRR
Sbjct: 960  PTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRY--RTEKPSKSPPPP-PPRR 1011


>AB051471-1|BAB21775.1|  762|Homo sapiens KIAA1684 protein protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 PRPSAGPCMTPEGL-VLPDTNPGLA*QINRLELSEWLRRTQRPSRTGPDPCPPRR 362
           P P   P   P G    P T P      + L +  +  RT++PS++ P P PPRR
Sbjct: 539 PTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRY--RTEKPSKSPPPP-PPRR 590


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,433,269
Number of Sequences: 237096
Number of extensions: 1423413
Number of successful extensions: 3870
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3862
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)