BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0837 (648 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U50197-1|AAA91254.1| 329|Caenorhabditis elegans Hypothetical pr... 29 2.1 Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical pr... 27 8.7 Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 27 8.7 U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 27 8.7 AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical... 27 8.7 AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical... 27 8.7 AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical ... 27 8.7 AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine re... 27 8.7 >U50197-1|AAA91254.1| 329|Caenorhabditis elegans Hypothetical protein F25E2.1 protein. Length = 329 Score = 29.5 bits (63), Expect = 2.1 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -2 Query: 194 IYV*CVLSHSLAG*ILYIYVFVSLWTYF 111 +Y+ CV+ H +A + YI+ F++ YF Sbjct: 168 LYLICVVEHDVAKVLFYIFAFITTLAYF 195 >Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical protein F53H2.3 protein. Length = 667 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 419 IFYIFLLLSIA*TGGQYHGPSGVNWLPGPITS 514 I + LLS + + HGPS ++W G +TS Sbjct: 59 ILHFSCLLSESAQSHRDHGPSSIHWTKGQLTS 90 >Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical protein F47B8.5 protein. Length = 579 Score = 27.5 bits (58), Expect = 8.7 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -3 Query: 142 FMCLCLYGLIFSFHEFVT-TTILKKFHFNMNFLIGFLTKIKETI 14 F +CL+ L FSF F+T +T FH + FL+ T K+ I Sbjct: 310 FEAICLFSL-FSFFNFITFSTSHFHFHNKIKFLLEGETVYKQKI 352 >U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotransmitter symporterfamily protein 12 protein. Length = 1022 Score = 27.5 bits (58), Expect = 8.7 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -3 Query: 220 FHTHVSIK-KSTSNVFYLILSPAEFYTFMCLCLYGLIFSFH 101 F H S+K K+ N L A F+ + LC G IF FH Sbjct: 533 FMNHFSMKNKAVENRLLAFLCLAGFFLGLPLCAQGGIFVFH 573 >AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical protein Y105E8A.10c protein. Length = 922 Score = 27.5 bits (58), Expect = 8.7 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 223 RFHTHVSIKKSTSNVFYLILSPAEFYTFMCL-CLYGLIFSFHEFVTTTILKKFHFNMN 53 +F T K T+ I + ++T + C YGL + E TTT+ ++F + N Sbjct: 266 KFETEEEGLKPTTTAQEKISGVSLYHTISSMPCTYGLATTHREHTTTTVCERFDPSRN 323 >AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical protein Y105E8A.10b protein. Length = 930 Score = 27.5 bits (58), Expect = 8.7 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 223 RFHTHVSIKKSTSNVFYLILSPAEFYTFMCL-CLYGLIFSFHEFVTTTILKKFHFNMN 53 +F T K T+ I + ++T + C YGL + E TTT+ ++F + N Sbjct: 274 KFETEEEGLKPTTTAQEKISGVSLYHTISSMPCTYGLATTHREHTTTTVCERFDPSRN 331 >AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical protein Y105E8A.10a protein. Length = 959 Score = 27.5 bits (58), Expect = 8.7 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -3 Query: 223 RFHTHVSIKKSTSNVFYLILSPAEFYTFMCL-CLYGLIFSFHEFVTTTILKKFHFNMN 53 +F T K T+ I + ++T + C YGL + E TTT+ ++F + N Sbjct: 303 KFETEEEGLKPTTTAQEKISGVSLYHTISSMPCTYGLATTHREHTTTTVCERFDPSRN 360 >AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine receptor, class bc (class b-like) protein 59 protein. Length = 296 Score = 27.5 bits (58), Expect = 8.7 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%) Frame = +1 Query: 388 FTSTTCELHTYF-LYFFIIK 444 F+ TTC L+TYF L+ F IK Sbjct: 15 FSVTTCSLNTYFVLFIFFIK 34 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,918,023 Number of Sequences: 27780 Number of extensions: 281966 Number of successful extensions: 599 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 599 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1434198608 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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