BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0835 (649 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 26 1.2 AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 26 1.2 U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 25 2.1 U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 25 2.1 U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 25 2.1 AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 3.6 >AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein protein. Length = 178 Score = 25.8 bits (54), Expect = 1.2 Identities = 13/59 (22%), Positives = 28/59 (47%) Frame = -3 Query: 440 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 264 ++ +T + T ++ TSEA T AAA +++++ + A ++ + TT Sbjct: 67 TSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTT 125 Score = 25.8 bits (54), Expect = 1.2 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = -3 Query: 416 SATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 285 + E++ T+EAQT +++ +++T TE+ +AA A +T Sbjct: 104 TTAEATTTTEAQTTSSS--DNSTTTEAAATTTAASETTADSSST 145 >AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase protein. Length = 1201 Score = 25.8 bits (54), Expect = 1.2 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 Query: 520 GSTPETLQDHLHQGPNSSHSYCPHNSYPTTKRRED 624 G PETL +H+ Q P + + C T+ ++D Sbjct: 1046 GVVPETLLEHMLQSPENWSNVCEATKRITSALQQD 1080 >U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 25.0 bits (52), Expect = 2.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 Query: 500 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 393 S L+WF RY N + + + ST V I+ T +++T Sbjct: 614 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 647 >U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 25.0 bits (52), Expect = 2.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 Query: 500 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 393 S L+WF RY N + + + ST V I+ T +++T Sbjct: 614 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 647 >U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette protein protein. Length = 673 Score = 25.0 bits (52), Expect = 2.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 Query: 500 SLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSIT 393 S L+WF RY N + + + ST V I+ T +++T Sbjct: 592 SYLSWF--RYANEALLINQWSTVVDGEIACTRANVT 625 >AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase protein. Length = 1154 Score = 24.2 bits (50), Expect = 3.6 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +1 Query: 520 GSTPETLQDHLHQGPNSSHSYCPHNSYPTTK 612 G PETL+ H+ Q P + + C T+K Sbjct: 986 GVLPETLEAHMLQSPTNWSNVCEAAKRITSK 1016 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 539,164 Number of Sequences: 2352 Number of extensions: 8930 Number of successful extensions: 16 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 63977715 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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