BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0834 (695 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 27 2.6 SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 27 2.6 >SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1441 Score = 27.1 bits (57), Expect = 2.6 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = -1 Query: 644 IQISDFTAHDCVISVIYVDFNSFLMAAPWHSNYKTD 537 + ++ F AH IYVD NSF+ + +++ D Sbjct: 978 LSVAPFHAHHAPQGYIYVDENSFIRICKFQEDFEYD 1013 >SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1033 Score = 27.1 bits (57), Expect = 2.6 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 375 HSQVCTICNDRYILSLNHCE 316 HS V N+R+ILSL +CE Sbjct: 177 HSDVTARFNERFILSLGNCE 196 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,695,068 Number of Sequences: 5004 Number of extensions: 56987 Number of successful extensions: 110 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 110 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 321151040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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