BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0834 (695 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY060980-1|AAL28528.1| 237|Drosophila melanogaster GM13219p pro... 29 6.0 AE014297-4073|AAF56670.2| 381|Drosophila melanogaster CG5880-PA... 29 6.0 AE014134-1285|AAS64649.1| 470|Drosophila melanogaster CG13788-P... 29 8.0 >AY060980-1|AAL28528.1| 237|Drosophila melanogaster GM13219p protein. Length = 237 Score = 29.1 bits (62), Expect = 6.0 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +1 Query: 205 WCNKTSSRHCEHK-TNDILYVPVFFCENSHHNCLSRFYFAVVERQNVSVVTYRTYLRMKQ 381 W + T + H +D+ P+F+ +++ +CL F+ V SVV+ ++ + Sbjct: 29 WHSLTFNAHMNSSYASDVCLTPIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPF 88 Query: 382 YVLYNYIIRYHNIFDNN 432 + + ++ Y + N Sbjct: 89 WWAKSQLVTYFLLIVGN 105 >AE014297-4073|AAF56670.2| 381|Drosophila melanogaster CG5880-PA protein. Length = 381 Score = 29.1 bits (62), Expect = 6.0 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +1 Query: 205 WCNKTSSRHCEHK-TNDILYVPVFFCENSHHNCLSRFYFAVVERQNVSVVTYRTYLRMKQ 381 W + T + H +D+ P+F+ +++ +CL F+ V SVV+ ++ + Sbjct: 29 WHSLTFNAHMNSSYASDVCLTPIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPF 88 Query: 382 YVLYNYIIRYHNIFDNN 432 + + ++ Y + N Sbjct: 89 WWAKSQLVTYFLLIVGN 105 >AE014134-1285|AAS64649.1| 470|Drosophila melanogaster CG13788-PC, isoform C protein. Length = 470 Score = 28.7 bits (61), Expect = 8.0 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = +1 Query: 253 ILYVPVFFCENSHHNCLSRFYFAVVERQNVSV-VTYRTYLRMKQYVLYNYIIRYHNIFDN 429 ++Y+ F + CL +F+ V+ Q V V + Y LR VL + + N+ Sbjct: 132 VIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIMYSKVLRFSYMVLISMFL--VNVLFT 189 Query: 430 NGTPLLIWIQQIFQPNPFLIQFLV 501 GT +++ ++ FL+ Sbjct: 190 GGTFSVLYSSEVAPTMALHFTFLI 213 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,604,612 Number of Sequences: 53049 Number of extensions: 527376 Number of successful extensions: 996 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 996 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3046624548 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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