Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0834
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p pro...    29   6.0  
AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA...    29   6.0  
AE014134-1285|AAS64649.1|  470|Drosophila melanogaster CG13788-P...    29   8.0  

>AY060980-1|AAL28528.1|  237|Drosophila melanogaster GM13219p
           protein.
          Length = 237

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +1

Query: 205 WCNKTSSRHCEHK-TNDILYVPVFFCENSHHNCLSRFYFAVVERQNVSVVTYRTYLRMKQ 381
           W + T + H      +D+   P+F+  +++ +CL  F+   V     SVV+   ++ +  
Sbjct: 29  WHSLTFNAHMNSSYASDVCLTPIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPF 88

Query: 382 YVLYNYIIRYHNIFDNN 432
           +   + ++ Y  +   N
Sbjct: 89  WWAKSQLVTYFLLIVGN 105


>AE014297-4073|AAF56670.2|  381|Drosophila melanogaster CG5880-PA
           protein.
          Length = 381

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +1

Query: 205 WCNKTSSRHCEHK-TNDILYVPVFFCENSHHNCLSRFYFAVVERQNVSVVTYRTYLRMKQ 381
           W + T + H      +D+   P+F+  +++ +CL  F+   V     SVV+   ++ +  
Sbjct: 29  WHSLTFNAHMNSSYASDVCLTPIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPF 88

Query: 382 YVLYNYIIRYHNIFDNN 432
           +   + ++ Y  +   N
Sbjct: 89  WWAKSQLVTYFLLIVGN 105


>AE014134-1285|AAS64649.1|  470|Drosophila melanogaster CG13788-PC,
           isoform C protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +1

Query: 253 ILYVPVFFCENSHHNCLSRFYFAVVERQNVSV-VTYRTYLRMKQYVLYNYIIRYHNIFDN 429
           ++Y+  F   +    CL +F+   V+ Q V V + Y   LR    VL +  +   N+   
Sbjct: 132 VIYLTAFVPNHRLERCLQKFHTMDVQLQTVGVKIMYSKVLRFSYMVLISMFL--VNVLFT 189

Query: 430 NGTPLLIWIQQIFQPNPFLIQFLV 501
            GT  +++  ++         FL+
Sbjct: 190 GGTFSVLYSSEVAPTMALHFTFLI 213


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,604,612
Number of Sequences: 53049
Number of extensions: 527376
Number of successful extensions: 996
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)