Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0834
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.13 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.5  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   8.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 360 TICNDRYILSLNHCEIETRKTIMMTIFTKKNWN 262
           TI + RY+L+  HC I+   T +  +  + +W+
Sbjct: 191 TIISKRYVLTAAHCIIDENTTKLAIVVGEHDWS 223


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 LRNRNEKDNYDDYFHKKKLEHIIYHL 245
           + N N K NY++  + KKL + I ++
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 LRNRNEKDNYDDYFHKKKLEHIIYHL 245
           + N N K NY++  + KKL + I ++
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 LRNRNEKDNYDDYFHKKKLEHIIYHL 245
           + N N K NY++  + KKL + I ++
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 LRNRNEKDNYDDYFHKKKLEHIIYHL 245
           + N N K NY++  + KKL + I ++
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 247 LFCVHNGETKFYY 209
           +FC +NGE + YY
Sbjct: 41  VFCRNNGEEEAYY 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,765
Number of Sequences: 438
Number of extensions: 4390
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)