BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0833
(698 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 27 0.43
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 4.0
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 24 4.0
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 24 5.3
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 24 5.3
AY070256-1|AAL59655.1| 227|Anopheles gambiae glutathione S-tran... 23 9.2
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 27.5 bits (58), Expect = 0.43
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 510 VRRATGSRLLVRLMNVQRT-SNTPPPLTDPQWELSLPG 620
VR ATGSR+ + + + S PPP P W LS G
Sbjct: 26 VRFATGSRVQSKNFKLYSSLSFFPPPCRVPGWRLSTSG 63
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 382 LVEYNMRSLQMRVLKAYQRPHPVTWSRFAVG 474
+VEY + + R + YQ HPV WS +G
Sbjct: 444 VVEYAL--VMARPMVLYQADHPVHWSPVFMG 472
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 24.2 bits (50), Expect = 4.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 147 HALLNKTFTFKGRNG--GPIE-RRQLHKAWGSSCSGV 248
H+L + F +N PI+ R+LHKA G SC V
Sbjct: 270 HSLQTQRPPFDAKNPFLAPIKVNRELHKAGGRSCMHV 306
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 23.8 bits (49), Expect = 5.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 139 KLLTHCSTKHLHSKAATGGPLSGDNSIKLGDRVALVYPKTIRLTSYARSTDAYKL 303
KLLTHC+T L + A G L S+ + + VY R + AY+L
Sbjct: 156 KLLTHCNTGSL-ATAGYGTALGVIRSVNERNLLEHVYCTETRPYNQGARLTAYEL 209
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 351 GLQQVGFLLGSCGI--QYALTSDACLKGLPKT 440
G + GF G I QY LT+ C++G+P +
Sbjct: 137 GSNRYGFHCGGVLIHNQYVLTAAHCIEGVPSS 168
>AY070256-1|AAL59655.1| 227|Anopheles gambiae glutathione
S-transferase E6 protein.
Length = 227
Score = 23.0 bits (47), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 90 KLSNSLTYGKLLSRSLKIAHALLNKTFTFKGRNGG 194
+LS YG+++ R LK A L+ +T K GG
Sbjct: 190 RLSKLPYYGEVMGRGLKAAGELM-QTLGSKNSGGG 223
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,622
Number of Sequences: 2352
Number of extensions: 16123
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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