Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0833
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot...   169   3e-42
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p...   169   3e-42
AY119520-1|AAM50174.1|  667|Drosophila melanogaster GH14596p pro...    36   0.070

>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown
           protein.
          Length = 1640

 Score =  169 bits (411), Expect = 3e-42
 Identities = 88/156 (56%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
 Frame = +3

Query: 48  SFKANMATVLDPNGKLSNSLTYGKLLSRSLKIAHALLNKTFTFKGRNGGPIERRQLHKAW 227
           SFK+ MATVLDPNGK++ +LTYGKLLSR+ KIAHAL  K F+      GP    Q+    
Sbjct: 327 SFKSPMATVLDPNGKVTTTLTYGKLLSRAQKIAHALSTKIFS-----KGP---EQVTLKP 378

Query: 228 GSSCSGV-PKNDPINFICAFYGCLQAGIVPVPIEVPLTRRDAGLQQVGFLLGSCGIQYAL 404
           G   + V P NDP++FI A+YGC+  G+VP+PIE+PL+  D   QQVGFLL SCGI  AL
Sbjct: 379 GDRVALVYPNNDPLSFITAWYGCMFRGLVPLPIELPLSSSDTPPQQVGFLLSSCGITVAL 438

Query: 405 TSDACLKGLPK-TSSGDVVSFRGWPSLHWVSTEKLP 509
           TS+ACLKGLPK T++G++   +GWP L W  TE LP
Sbjct: 439 TSEACLKGLPKSTTTGEIAKLKGWPRLQWFVTEHLP 474



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +2

Query: 548 DECPAHIEHTSAADGSAMGVIVTRASMLAHCRMLLVACNYPRG 676
           D   A+IE+T+  +GS MGV VTRA+M+ HCR L +AC+Y  G
Sbjct: 489 DSAAAYIEYTTDKEGSVMGVTVTRAAMINHCRALTMACHYTEG 531



 Score = 35.5 bits (78), Expect = 0.070
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +3

Query: 264  INFICAFYGCLQAGIVPVPIEVPLTRR-DAGLQQVGFLLGSCGIQYALTSDACLKGLPKT 440
            ++ +CAFYGCL  G +P+ I  P  +  +  L  V  ++        L+    +K L   
Sbjct: 1071 LDLLCAFYGCLYLGAIPITIRPPHPQNLNTTLPTVRMIVDVSKSGIVLSIQPIIKLLKSR 1130

Query: 441  SSGDVVSFRGWPSLHWVSTEKLPVRRATG 527
             +   +  + WP +  +  +  P R+  G
Sbjct: 1131 EAATSIDPKTWPPI--LDIDDNPKRKYAG 1157


>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
           protein.
          Length = 1773

 Score =  169 bits (411), Expect = 3e-42
 Identities = 88/156 (56%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
 Frame = +3

Query: 48  SFKANMATVLDPNGKLSNSLTYGKLLSRSLKIAHALLNKTFTFKGRNGGPIERRQLHKAW 227
           SFK+ MATVLDPNGK++ +LTYGKLLSR+ KIAHAL  K F+      GP    Q+    
Sbjct: 460 SFKSPMATVLDPNGKVTTTLTYGKLLSRAQKIAHALSTKIFS-----KGP---EQVTLKP 511

Query: 228 GSSCSGV-PKNDPINFICAFYGCLQAGIVPVPIEVPLTRRDAGLQQVGFLLGSCGIQYAL 404
           G   + V P NDP++FI A+YGC+  G+VP+PIE+PL+  D   QQVGFLL SCGI  AL
Sbjct: 512 GDRVALVYPNNDPLSFITAWYGCMFRGLVPLPIELPLSSSDTPPQQVGFLLSSCGITVAL 571

Query: 405 TSDACLKGLPK-TSSGDVVSFRGWPSLHWVSTEKLP 509
           TS+ACLKGLPK T++G++   +GWP L W  TE LP
Sbjct: 572 TSEACLKGLPKSTTTGEIAKLKGWPRLQWFVTEHLP 607



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +2

Query: 548 DECPAHIEHTSAADGSAMGVIVTRASMLAHCRMLLVACNYPRG 676
           D   A+IE+T+  +GS MGV VTRA+M+ HCR L +AC+Y  G
Sbjct: 622 DSAAAYIEYTTDKEGSVMGVTVTRAAMINHCRALTMACHYTEG 664



 Score = 35.5 bits (78), Expect = 0.070
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +3

Query: 264  INFICAFYGCLQAGIVPVPIEVPLTRR-DAGLQQVGFLLGSCGIQYALTSDACLKGLPKT 440
            ++ +CAFYGCL  G +P+ I  P  +  +  L  V  ++        L+    +K L   
Sbjct: 1204 LDLLCAFYGCLYLGAIPITIRPPHPQNLNTTLPTVRMIVDVSKSGIVLSIQPIIKLLKSR 1263

Query: 441  SSGDVVSFRGWPSLHWVSTEKLPVRRATG 527
             +   +  + WP +  +  +  P R+  G
Sbjct: 1264 EAATSIDPKTWPPI--LDIDDNPKRKYAG 1290


>AY119520-1|AAM50174.1|  667|Drosophila melanogaster GH14596p
           protein.
          Length = 667

 Score = 35.5 bits (78), Expect = 0.070
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +3

Query: 264 INFICAFYGCLQAGIVPVPIEVPLTRR-DAGLQQVGFLLGSCGIQYALTSDACLKGLPKT 440
           ++ +CAFYGCL  G +P+ I  P  +  +  L  V  ++        L+    +K L   
Sbjct: 98  LDLLCAFYGCLYLGAIPITIRPPHPQNLNTTLPTVRMIVDVSKSGIVLSIQPIIKLLKSR 157

Query: 441 SSGDVVSFRGWPSLHWVSTEKLPVRRATG 527
            +   +  + WP +  +  +  P R+  G
Sbjct: 158 EAATSIDPKTWPPI--LDIDDNPKRKYAG 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,252,153
Number of Sequences: 53049
Number of extensions: 748266
Number of successful extensions: 2336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2328
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)