Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0833
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.1  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   2.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   4.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   8.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.5  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 122 LKPLIENCSRIAQQNIYIQ 178
           +K L+  CS I+  NIYI+
Sbjct: 97  IKKLVAECSVISDANIYIR 115


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 122 LKPLIENCSRIAQQNIYIQ 178
           +K L+  CS I+  NIYI+
Sbjct: 97  IKKLVAECSVISDANIYIR 115


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 17/70 (24%), Positives = 29/70 (41%)
 Frame = +3

Query: 126 SRSLKIAHALLNKTFTFKGRNGGPIERRQLHKAWGSSCSGVPKNDPINFICAFYGCLQAG 305
           SR  KI  +L NKT      N            + ++ +    N+  N+   +Y  +   
Sbjct: 309 SREPKIISSLSNKTI----HNNNNYNNNN----YNNNYNNYNNNNYNNYKKLYYNIINIE 360

Query: 306 IVPVPIEVPL 335
            +PVP+ VP+
Sbjct: 361 QIPVPVPVPI 370


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 93  LSNSLTYGKLLSRSLKIAHALLNKTFTFK 179
           L N   YGK   + L+I H L  K    K
Sbjct: 234 LFNLTKYGKNQIKLLEIIHGLTKKVIQLK 262


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 268 LIGSFLGTPEQLDPQAL 218
           ++GS +GTP  + P+ L
Sbjct: 750 MLGSIVGTPVHMAPELL 766


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 268 LIGSFLGTPEQLDPQAL 218
           ++GS +GTP  + P+ L
Sbjct: 788 MLGSIVGTPVHMAPELL 804


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,051
Number of Sequences: 438
Number of extensions: 4301
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)