BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0833 (698 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g62900.1 68416.m07066 expressed protein ; expression supporte... 30 1.7 At2g21850.1 68415.m02596 DC1 domain-containing protein contains ... 29 3.0 At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 29 3.9 At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pin... 28 6.8 At5g59540.1 68418.m07461 oxidoreductase, 2OG-Fe(II) oxygenase fa... 28 6.8 At3g16170.1 68416.m02041 acyl-activating enzyme 13 (AAE13) simil... 28 6.8 At1g76170.1 68414.m08845 expressed protein contains Pfam profil... 28 6.8 At5g01920.1 68418.m00111 protein kinase family protein contains ... 27 9.0 At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme ... 27 9.0 >At3g62900.1 68416.m07066 expressed protein ; expression supported by MPSS Length = 1401 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 166 HLHSKAATGGPLSGDNSIKLGDRVALVYPKTIRLTSYARSTDAYKLE 306 H + K + G + D KLGD A YP+ + ++++D+ K E Sbjct: 384 HENPKTISAGSVREDKKAKLGDNEASGYPRKVGKYKGSKASDSVKKE 430 >At2g21850.1 68415.m02596 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 772 Score = 29.1 bits (62), Expect = 3.0 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Frame = -1 Query: 221 FMELSPLNGPPVAAFE-CKCFVEQCVSNFQ*AA*ELSICKGITELPIRIEHSCHVS--LK 51 F PL P +A C + + + + S+CKG ++LP ++ H H L+ Sbjct: 7 FSHECPLTSPKIAVDGICSICYKDDLVELACSPCDFSLCKGCSQLPQKVWHDFHPDHPLE 66 Query: 50 RGLHRVSTPPWH 15 LH+ P H Sbjct: 67 FCLHQYDQKPEH 78 >At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family protein similar to peroxisomal-coenzyme A synthetase (FAT2) [gi:586339] from Saccharomyces cerevisiae; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA; identical to cDNA adenosine monophosphate binding protein 3 AMPBP3 (AMPBP3)GI:20799714 Length = 514 Score = 28.7 bits (61), Expect = 3.9 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 145 LTHCSTKHLHSKAATGGPLSGDNSIKLGDRVALVYPKTI 261 LTH L +AA+ L D IK GD VAL +P T+ Sbjct: 31 LTHARLHDLIERAASR--LVSDAGIKPGDVVALTFPNTV 67 >At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pinus radiata, GI:5487873 Length = 327 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 Query: 540 VRLMNVQRTSNTPPPLTDPQWELSLP 617 +RLMN Q PP +TD W+LSLP Sbjct: 211 IRLMNDQVC---PPIVTDVMWDLSLP 233 >At5g59540.1 68418.m07461 oxidoreductase, 2OG-Fe(II) oxygenase family protein similar to desacetoxyvindoline-4-hydroxylase [Catharanthus roseus] GI:2352812; contains Pfam profile PF03171: oxidoreductase, 2OG-Fe(II) oxygenase family Length = 366 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +3 Query: 285 YGCLQAGIVPVPIEVPLTRRDAGLQQVGFLLGSCGIQYALTSDA 416 + C A P P E+P T RDA + +L G+ + L S+A Sbjct: 157 FSCYIAPDPPAPEEIPETCRDAMFEYSKHVLSFGGLLFELLSEA 200 >At3g16170.1 68416.m02041 acyl-activating enzyme 13 (AAE13) similar to malonyl CoA synthetase GB:AAF28840 from [Bradyrhizobium japonicum]; contains Pfam AMP-binding enzyme domain PF00501; identical to cDNA acyl-activating enzyme 13 (At3g16170) GI:29893232, acyl-activating enzyme 13 [Arabidopsis thaliana] GI:29893233 Length = 544 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 557 PAHIEHTSAADGSAMGVIVTRASMLAHCRMLLVACNY 667 PA I +TS G GV+ T S+ + RML A Y Sbjct: 172 PALIVYTSGTTGKPKGVVHTHNSINSQVRMLTEAWEY 208 >At1g76170.1 68414.m08845 expressed protein contains Pfam profile PF01171: PP-loop family Length = 299 Score = 27.9 bits (59), Expect = 6.8 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = -2 Query: 346 SRRVSGTSIGTGTIPACRHP*NAHMKLIGSFLGTPEQLDPQALWSCLRS 200 SR S T+ G IP C + NA+ F+ E+L P+A+ ++S Sbjct: 170 SRCTSITTGEDGPIPRCIYSPNAYRGFACEFINDLERLRPRAILDIIKS 218 >At5g01920.1 68418.m00111 protein kinase family protein contains eukaryotic protein kinase domain, INTERPRO:IPR000719 Length = 495 Score = 27.5 bits (58), Expect = 9.0 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +3 Query: 300 AGIVPVPIEVPLTRRDAGLQQVGFLLGSCGIQYALTS-DACLKGLPKTSSGDVVSFRGWP 476 AGIV + + VP R AGL+ F L ++Y L + P S D+ S RGW Sbjct: 392 AGIVLLQMAVPTLRSTAGLK--NFNLEIKSVEYDLNRWRERTRTRPDLSILDLDSGRGWD 449 Query: 477 SLHWVSTEKLPVRR 518 + + +E+ +RR Sbjct: 450 LVTKLISERGSLRR 463 >At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme oxygenase 3 [Arabidopsis thaliana] gi|14485563|gb|AAK63006 Length = 285 Score = 27.5 bits (58), Expect = 9.0 Identities = 19/64 (29%), Positives = 26/64 (40%) Frame = +3 Query: 96 SNSLTYGKLLSRSLKIAHALLNKTFTFKGRNGGPIERRQLHKAWGSSCSGVPKNDPINFI 275 SN TY + L+ A +L FK + E K + + +NDP FI Sbjct: 140 SNFPTYAGFKNTGLERAESLRKDLEWFKEQGYEIPEPMAPGKTYSEYLKDLAENDPQAFI 199 Query: 276 CAFY 287 C FY Sbjct: 200 CHFY 203 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,991,038 Number of Sequences: 28952 Number of extensions: 332206 Number of successful extensions: 1055 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1055 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1496852856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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