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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0831
         (232 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   141   1e-35
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...    88   1e-19
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    86   7e-19
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    77   4e-16
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    54   3e-09
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    52   1e-08
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    46   7e-07
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    32   0.009
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    31   0.020
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce...    29   0.062
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    29   0.062
SPBC17G9.07 |rps2402|rps24-2|40S ribosomal protein S24|Schizosac...    28   0.14 
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    27   0.25 
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    27   0.25 
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i...    27   0.33 
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    27   0.44 
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa...    26   0.58 
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   0.58 
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    25   1.0  
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc...    25   1.3  
SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein Rga5|Sch...    25   1.8  
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar...    24   2.3  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    24   3.1  
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po...    24   3.1  
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual    23   4.1  
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe...    23   4.1  
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos...    23   4.1  
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|...    23   4.1  
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces...    23   5.4  
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch...    23   5.4  
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch...    23   7.2  
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces...    23   7.2  
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    23   7.2  
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual    23   7.2  
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr...    23   7.2  
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa...    23   7.2  
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi...    23   7.2  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    22   9.5  
SPCC1753.02c |git3||G-protein coupled receptor Git3|Schizosaccha...    22   9.5  
SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr 1|||...    22   9.5  
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    22   9.5  
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc...    22   9.5  
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe...    22   9.5  
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni...    22   9.5  
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc...    22   9.5  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    22   9.5  
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa...    22   9.5  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  141 bits (341), Expect = 1e-35
 Identities = 67/76 (88%), Positives = 69/76 (90%)
 Frame = +3

Query: 3   TFYNELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRT 182
           TFYNELRVAPEEHP LLTEAPLNPK NREKMTQI+FETFN PA  VAIQAVLSLYASGRT
Sbjct: 89  TFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRT 148

Query: 183 TGIGLDSGDGVSHTEP 230
           TGI LDSGDGV+HT P
Sbjct: 149 TGIVLDSGDGVTHTVP 164


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score = 88.2 bits (209), Expect = 1e-19
 Identities = 40/76 (52%), Positives = 54/76 (71%)
 Frame = +3

Query: 3   TFYNELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRT 182
           TF+ +L++ P    +LLTE P+NP  NREKM + MFE +    + VAIQAVLSLYA G +
Sbjct: 89  TFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLS 148

Query: 183 TGIGLDSGDGVSHTEP 230
           +G+ +DSGDGV+H  P
Sbjct: 149 SGVVVDSGDGVTHIVP 164


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 85.8 bits (203), Expect = 7e-19
 Identities = 38/72 (52%), Positives = 52/72 (72%)
 Frame = +3

Query: 15  ELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRTTGIG 194
           +L   PEEHP+LLTE PL    N+EK+ +  +ET N PA+  ++Q VL+LYAS RTTGI 
Sbjct: 98  QLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIV 157

Query: 195 LDSGDGVSHTEP 230
           L+ GDG++H+ P
Sbjct: 158 LECGDGLTHSVP 169


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 76.6 bits (180), Expect = 4e-16
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
 Frame = +3

Query: 3   TFYNELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRT 182
           + +  LR  PE+H  LLTE PLNP +NRE   +IMFE+FN   + +A+QAVL+L AS  +
Sbjct: 112 SLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTS 171

Query: 183 --------TGIGLDSGDGVSHTEP 230
                   TG  +DSGDGV+H  P
Sbjct: 172 SKVTDRSLTGTVVDSGDGVTHIIP 195


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 54.0 bits (124), Expect = 3e-09
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = +3

Query: 15  ELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRTTGIG 194
           +L+  P EHP+L+TE   NP +NR K  + MFE+   PA  +A Q   + +ASG+ T   
Sbjct: 91  QLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACL 150

Query: 195 LDSG 206
           +D G
Sbjct: 151 VDIG 154


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 52.0 bits (119), Expect = 1e-08
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +3

Query: 36  EHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGR--TTGIGLDSGD 209
           EHP+ +TE   NP   R  MT+++FE +N P++   I  + S Y + +  ++GI L+ G+
Sbjct: 115 EHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGN 174

Query: 210 GVSHTEP 230
             SH  P
Sbjct: 175 AASHVIP 181


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 46.0 bits (104), Expect = 7e-07
 Identities = 21/72 (29%), Positives = 41/72 (56%)
 Frame = +3

Query: 15  ELRVAPEEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRTTGIG 194
           +L+V P E+ +++TE   NP+  R+++ +  FE  + PA  +  QAV   +A+ ++T + 
Sbjct: 94  KLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALI 153

Query: 195 LDSGDGVSHTEP 230
           +D G   +   P
Sbjct: 154 VDIGSDNASVTP 165


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 32.3 bits (70), Expect = 0.009
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +1

Query: 7   STMSCVSPPRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPP 186
           ST S  S P  T S S  +PS   +++        +H T P     +K  SR   P+ PP
Sbjct: 127 STPSISSIPHTTSSVSNDIPSVLGSSDHPIDLDNPEHLTPPSSFITAKQLSRLPTPLPPP 186

Query: 187 VSGWTPATECPTPS 228
            S   P     T S
Sbjct: 187 SSSSLPTGTISTNS 200


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.1 bits (67), Expect = 0.020
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +3

Query: 6    FYNELRVAPEEHPVLLTE--APLNPKDNREKMTQIMFETFNTPAM---CVAIQ 149
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1008

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
 Frame = +1

Query: 1   IPSTMSC-VSPPRNTQSCSLRLPSTPR-----TTERK*PRSCSKHSTRPPCASPSKPCSR 162
           +P+T S  V+P  +++S S   PSTPR     T  +  P+    +S   P ++PSK    
Sbjct: 425 LPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVPKMNPKLQGGNSVTAP-STPSKVLPA 483

Query: 163 CTRPVVPPVSGWTPATECPTPS 228
            +  V P   G   +T   TP+
Sbjct: 484 MSPKVAPKFQGGRSSTAPSTPN 505


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = +1

Query: 37  NTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPPVSGWTPATEC 216
           +T S   +   T  TT         + +  PP   P    +  T PV  PV+    A   
Sbjct: 337 STPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPV 396

Query: 217 PTPSP 231
           P P+P
Sbjct: 397 PPPAP 401


>SPBC17G9.07 |rps2402|rps24-2|40S ribosomal protein
           S24|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 134

 Score = 28.3 bits (60), Expect = 0.14
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 57  EAPLNPKDNREKMTQIMFETFNTPAMCVAIQAVLSLYASGRTTGIGL--DSGDGVSHTEP 230
           +A L+  + REK+ Q+    + T + CV    + + +  GR+TG  L  DS + +   EP
Sbjct: 32  KANLSKNEIREKLAQM----YKTDSECVQAFGLRTHFGGGRSTGFALIYDSTESMKKFEP 87


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 48  LLTEAPLNPKDNREKMTQIMFETFN 122
           +L  APL+ ++  +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 62   SPQPQGQQRENDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 211
            +PQ +    EN+ D++R++  +RH RR P +A  +  R  H  +   R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474


>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
           5-->4-isomerase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 340

 Score = 27.1 bits (57), Expect = 0.33
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 202 ESSPIPVVRPDAYSESTA 149
           ES PIP V  DAY+ES A
Sbjct: 132 ESQPIPEVHMDAYNESKA 149


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 31  PRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCT 168
           P+ +Q+ S+ LP+ PRTT    P + +     P    P  P S  T
Sbjct: 814 PKTSQASSI-LPTVPRTTSYTSPYATTSSHITPADVHPLPPPSTST 858


>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1072

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -1

Query: 229 GSVWDTPSPESSPIPVVRPDAYSESTAWMATHMAGVLNVSNMIWVIFSLLSL 74
           GS    PS    PIP++ P+  S +   +   +   L+VS  I   FS+L +
Sbjct: 493 GSTKTLPSIGKKPIPLLDPNPISSTPISITFWVIMFLSVSFTIVTFFSILRI 544


>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 551

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 25  SPPRNTQSCSLRLPSTPRTTER 90
           SPP++T+  S R PS P + E+
Sbjct: 285 SPPQSTRPSSTRFPSVPLSDEK 306


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
 Frame = +1

Query: 64  PSTPRTTERK*PRSCSKHSTRPPCA--SPSKPCSRCTRPVVPPVSGWTPATECPTPS 228
           PS P +     P         PP A  +P  P      P +PP +   P    P P+
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485



 Score = 24.6 bits (51), Expect = 1.8
 Identities = 21/76 (27%), Positives = 27/76 (35%)
 Frame = +1

Query: 1   IPSTMSCVSPPRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVV 180
           IP   +   PP    S   R  + P  T    P S     + PP A PS P      P +
Sbjct: 395 IPGRSAPALPPLGNAS---RTSTPPVPTPPSLPPSAPP--SLPPSAPPSLPMGAPAAPPL 449

Query: 181 PPVSGWTPATECPTPS 228
           PP +   P      P+
Sbjct: 450 PPSAPIAPPLPAGMPA 465


>SPBC4C3.12 |sep1||fork head transcription factor
           Sep1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 663

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = +1

Query: 136 ASPSKPCSRCTRPVVPPVSGWT---PATECPTPS 228
           AS  KP S+ TRP +P  +  T   P    P PS
Sbjct: 61  ASFQKPSSKATRPYIPSYTRLTYSVPPLPIPPPS 94


>SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein
           Rga5|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 361

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +1

Query: 31  PRNTQSCSLRLPS-TPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPPVS 192
           P    S S+R+ S  PR    K  RS S+HS+     SPS   S      V P S
Sbjct: 276 PTPIASTSIRINSFNPRNGSIKRWRSFSRHSSATYSNSPSSNFSNMKSSEVDPGS 330


>SPBC23G7.08c |rga7||GTPase activating protein
           Rga7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 20/68 (29%), Positives = 26/68 (38%)
 Frame = +1

Query: 25  SPPRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPPVSGWTP 204
           S   +T   S    S PRT+    P + S    +PP A  S P    T P +   +  T 
Sbjct: 412 STANDTNGSSSSSSSNPRTSS---PLA-SNAENKPPVAQQSPPVLLPTLPPIQTTTIQTS 467

Query: 205 ATECPTPS 228
               P PS
Sbjct: 468 REVAPPPS 475


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 151 PCSRCTRPVVPPVSGWTPATECP 219
           PC+     + PPV+  TP  +CP
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCP 643



 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +1

Query: 46  SCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRC 165
           +C   +P  P       P+SC     +  C   S+PC  C
Sbjct: 634 ACGTPIPDCPYLCVL--PKSCHHPQVKHNCHPTSEPCPPC 671


>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 713

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +3

Query: 33  EEHPVLLTEAPLNPKDNREKMTQIMFETFNTPAMCVAIQAV 155
           ++ P L +++    K     ++Q++F   N PAMC  ++++
Sbjct: 441 KKEPNLESQSSNKIKTTIFPVSQLLFSNANVPAMCQRLRSL 481


>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 426

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 83  VVLGVEGSLSEQDWVF 36
           V + V GSL EQ+W F
Sbjct: 96  VDMAVNGSLFEQEWAF 111


>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 738

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 25  SPPRNTQSCSLRLP-STPRTTERK*P---RSCSKHSTRPPCASPSKPCSRCTR 171
           +PP +T +  ++ P +T    +++ P   R+C+K          ++PC RC +
Sbjct: 261 TPPLSTVNKIIKKPKATTGKVKKRLPQAKRACAKCQKDNKKCDDARPCQRCIK 313


>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 732

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 41  PSPAH*GSPQPQGQQRENDPDHVRNIQHARHVRRHPS 151
           PS  H G+P P G+Q       + N+Q    + + P+
Sbjct: 108 PSANHHGNPFPNGKQSIKAMPSLVNLQEDSVISKFPN 144


>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
            subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1752

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = +1

Query: 16   SCVSPPRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPPVSG 195
            S +SP     S S    S   +T      S   +S   P  SP+ P    T P   P S 
Sbjct: 1545 SAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604

Query: 196  WTPATECPTPSP 231
               AT  P+ SP
Sbjct: 1605 SYSATS-PSYSP 1615


>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 967

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 208 SPESSPIPVVRPDAYSESTAWMATHMA 128
           S   SP+PV++  A SE+    + H A
Sbjct: 122 SVAESPVPVLQSSAVSEADDMASAHSA 148


>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
           Nak1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 652

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 133 CASPSKPCSRCTRPVVPPVSGWTPATE 213
           C+S  KP +   R  +PP+S  +PA +
Sbjct: 562 CSSTPKPFNSKLRAHLPPLSIGSPAVQ 588


>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 563

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +1

Query: 64  PSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRC 165
           P   +   ++ P+SC     R       +PCSRC
Sbjct: 5   PPALKKFRKRSPKSCLICRRRKVKCDRQQPCSRC 38


>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 412

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 131 HVRRHPSRALAVRVRSYHRYRAG 199
           +VR HP  A+ +R    H Y +G
Sbjct: 248 YVRLHPGEAVFLRALDPHAYVSG 270


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 110 RNIQHARHVRRHPSRALAVRVRSYH 184
           RN+   R+ +R  SR  A++  SYH
Sbjct: 47  RNVAIQRNAKREFSRCAALKNFSYH 71


>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 533

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 227 LGVGHSVAGVQPDTGGTTGRVQREHGLDG 141
           LG+  SV G+  D GG+       +GL G
Sbjct: 215 LGIKASVLGIGSDIGGSIRSPAANNGLFG 243


>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 661

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 100 RSCSKHSTRPPCASPSKPCS 159
           R  S+H  R PC SP    S
Sbjct: 510 RKGSRHGPREPCLSPDASSS 529


>SPCC18B5.03 |wee1||dual specificity protein kinase
           Wee1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 877

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 65  PQPQGQQRENDPDHVRNIQHARHVRRHPS 151
           P P+G +RE D +++     A H+   P+
Sbjct: 719 PVPRGMEREGDCEYIAPEVLANHLYDKPA 747



 Score = 22.2 bits (45), Expect = 9.5
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 7   STMSCVSPPRNTQSCSLRLPSTPRTTERK*PRSCSKHSTRPPCASPSKP 153
           ST S  S   NT   SL  P    T+      +   H   PP  + S+P
Sbjct: 44  STSSTSSQKPNTSFTSLFGPRKQTTSSPSFSHAAPLHPLSPPSFTHSQP 92


>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
           Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 690

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 109 SKHSTRPPCASPSKPCSRCTRPVVPPVSGWTPATECPTPSP 231
           S+H +     +PS   +    P+ P ++ W P T+ PT  P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQ-PTFQP 283


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +1

Query: 151  PCSRCTRPVVPPVSGWTPATECPTPSP 231
            P    + P V P S   P    PTP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPP 1709


>SPCC1753.02c |git3||G-protein coupled receptor
           Git3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 466

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 64  PSTPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVVPPVSGWTPA 207
           P T  T       S S +S++   +  S+P      P +PP S  TPA
Sbjct: 252 PDTNSTLTYTPSNSQSIYSSQSQPSPYSRPLLSSVHPNLPPGSQSTPA 299


>SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 498

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 157 STAWMATHMAGVLNVSNMI 101
           ST    TH+ G+LN  N +
Sbjct: 351 STHLTRTHLGGILNAGNTV 369


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 172 PVVPPVSGWTPATECPTPSP 231
           P  PP  G+ P ++ P P P
Sbjct: 10  PPPPPPPGFEPPSQPPPPPP 29


>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
           Thi1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 775

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 199 SSPIPVVRPDAYSESTAWMATHMAGVLNVSNM 104
           S P PV+ PD     +  +  +M  V+N++ +
Sbjct: 425 SIPYPVILPDLEIPGSQSIVENMRAVINLAKL 456


>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 871

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 127 PPCASPSKPCSRCTRPVVP 183
           PP A+PS   S+ T+  VP
Sbjct: 400 PPLATPSSRNSKSTQSAVP 418


>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
            Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 960

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 92   NDPDHVRNIQHARHVRRHPSRALAVR 169
            N  DH  +I+HA +++ H   + AVR
Sbjct: 924  NTGDHPVSIKHAINIKFHDGFSNAVR 949


>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 474

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 133 CASPSKPCSRCTRPVVPPVSGWTPATE 213
           C SP K     TR  V  V+ WT   E
Sbjct: 258 CVSPEKRSLAKTREAVLAVTKWTTDDE 284


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   STMSCVSPPRNTQ-SCSLRLP-STPRTTERK*PRSCSKHSTRPPCASPSKPCSRCTRPVV 180
           +++S  SP   T  SC+     STP  TE     S +  +       PS   S  T   +
Sbjct: 62  ASLSTGSPVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSI 121

Query: 181 PPVSGWTPATECPTPS 228
           PP  G +  +   TP+
Sbjct: 122 PPTGGSSSLSTPITPT 137


>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 422

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 196 SPIPVVRPDAYSESTAWMATHMAGVLNVSNMIWVIFSLLSLGLRG 62
           +P+P  R      +T W  TH+  V    N+I+    + S G  G
Sbjct: 27  NPMPTFR---LLRNTKWSWTHLQYVFLAGNLIFACIVIESPGFWG 68


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,197,045
Number of Sequences: 5004
Number of extensions: 24695
Number of successful extensions: 105
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 56
effective length of database: 2,082,254
effective search space used: 41645080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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