Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0830
(670 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahym... 39 0.13
UniRef50_Q23J70 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q8W1E4 Cluster: At1g12650/T12C24_1; n=3; core eudicotyl... 34 2.7
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0... 34 2.7
UniRef50_Q7R380 Cluster: GLP_554_2484_5126; n=2; Giardia lamblia... 34 2.7
UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, who... 34 2.7
UniRef50_A6CZV3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma g... 33 6.2
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA phosphor... 33 8.2
>UniRef50_Q22N16 Cluster: KOW motif family protein; n=1; Tetrahymena
thermophila SB210|Rep: KOW motif family protein -
Tetrahymena thermophila SB210
Length = 778
Score = 38.7 bits (86), Expect = 0.13
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 85 WNCKFVHYYDCILYFYNHKFRQDYTIKNIN 174
+ C+ +H Y +++ +N KFR YT++NIN
Sbjct: 625 YQCQVIHVYKSLVFLFNPKFRDTYTVENIN 654
>UniRef50_Q23J70 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1659
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 157 CSLGEICDYRSIKYNHNSVQTYNSN*L*SNFDYCGTSSYYYC 32
C LG+ C Y + N N+ + NSN S+ D C +YYYC
Sbjct: 621 CLLGDTCQY--VDPNVNTKCSINSNQCSSSIDNCDLCNYYYC 660
>UniRef50_Q8W1E4 Cluster: At1g12650/T12C24_1; n=3; core
eudicotyledons|Rep: At1g12650/T12C24_1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 248
Score = 34.3 bits (75), Expect = 2.7
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = -1
Query: 637 KRALVVLVSILYREPATRNGGANISRAHEVIDR--A*AGKFESYYLHSLQINRKSRMFLS 464
K L + +L EP+T+N GA I H+ +R A GK YYL +I +++ +
Sbjct: 155 KNQLTYVEKMLKYEPSTQNKGAAILTEHKKKEREAAKEGK-RPYYLKKSEIRKQT--LIE 211
Query: 463 IYILIREAKTLYPFLRKLRGRRSMKFSTFI 374
Y ++E+ L +L K R + + K F+
Sbjct: 212 KYNSLKESGKLTSYLDKRRKKNATKDHRFM 241
>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein
PF07_0118; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF07_0118 - Plasmodium falciparum (isolate 3D7)
Length = 5561
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 88 NCKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQ 228
N +FV Y I FY++ F I N +KD QY YS ++N + Q
Sbjct: 401 NIQFVLPYKPIRMFYSNNFLFFVNIINKSKDLQYFTYSIYNNNHKNQ 447
>UniRef50_Q7R380 Cluster: GLP_554_2484_5126; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_554_2484_5126 - Giardia lamblia ATCC
50803
Length = 880
Score = 34.3 bits (75), Expect = 2.7
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -1
Query: 637 KRALVVLVSILYREPATRNGGANISRAHEVIDRA*AGKFESYYLHSLQINRKSRMFLSIY 458
K L VL + L P T GGA+ +V ++ +FES SL NRK R +
Sbjct: 263 KTGLYVLPAALVLPPRTTLGGASSRGGTDVAEQKAQCRFESRVTQSLTANRKRRSVVYGT 322
Query: 457 ILIREAKTLY 428
+++ + T++
Sbjct: 323 VILTDNSTIF 332
>UniRef50_A0DZ74 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 853
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 118 ILYFYNHKFRQDYTIKNINKDKQYLIYS 201
+ YF+N++F Q T +N+N + QY+IYS
Sbjct: 312 LTYFHNNQFIQGITEQNLNSNLQYIIYS 339
>UniRef50_A6CZV3 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 453
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 600 VNQPQGMEVRTFHAHTRSSTGRKQVNSNHTTCIHYK 493
+ Q +G+EVRT + TRS R + TT IHY+
Sbjct: 224 ITQVEGVEVRTGNTRTRSDAFRGNLIGTRTTDIHYR 259
>UniRef50_Q9MTE3 Cluster: Ribosomal protein S3; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S3 - Toxoplasma gondii
Length = 224
Score = 33.1 bits (72), Expect = 6.2
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 94 KFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDN-RRQEQKF 234
KF +CI YFYN+ + IK IN K+ IY + DN +QK+
Sbjct: 68 KFQLNINCIFYFYNYFLKLKIFIKEINNIKR--IYKKIDNLNNLKQKY 113
>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1806
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 91 CKFVHYYDCILYFYNHKFRQDYTIKNINKDKQYLIYSQFDNRRQEQKFDNK 243
CK YD +Y+YN K ++ Y +NK +LIY Q+++ + NK
Sbjct: 223 CKNNIEYDNNIYYYNKKIQKFYGY--VNKQNDHLIYKQWNSYKNISTDQNK 271
>UniRef50_Q5ADW4 Cluster: Likely initiator-specific tRNA
phosphoribosyl transferase; n=1; Candida albicans|Rep:
Likely initiator-specific tRNA phosphoribosyl
transferase - Candida albicans (Yeast)
Length = 437
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 142 FRQDYTIKNINKDKQYLIYSQFDNRRQEQKF 234
F ++YTI +I KD+Q L YS N++ KF
Sbjct: 325 FHEEYTITDIPKDRQILQYSISSNKKGSNKF 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,985,689
Number of Sequences: 1657284
Number of extensions: 11540924
Number of successful extensions: 26239
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26228
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -