Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0830
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein. 30 8.6
BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein. 30 8.6
BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein. 30 8.6
AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens ... 30 8.6
AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein. 30 8.6
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 30 8.6
AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant pr... 30 8.6
>CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein.
Length = 757
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 639 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 689
>BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 963 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 1013
>BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein.
Length = 787
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 669 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 719
>AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ90262 fis, clone NT2RM4000965, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 525
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 405 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 455
>AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14965 fis, clone SKNMC1000011, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 434
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 316 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 366
>AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23338 fis, clone HEP13242. ).
Length = 757
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 639 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 689
>AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 963 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 1013
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant protein.
Length = 1264
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 1146 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 1196
>AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant
protein.
Length = 758
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 508 GSMIRIYLLTPGR*PRVRVKCSHLHSLWLVHDTIY*LKQRELFCFFFHSTP 660
G++ R+ + +P R P +V + LH+L L D + LF F + S+P
Sbjct: 640 GALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSP 690
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,208,268
Number of Sequences: 237096
Number of extensions: 1703528
Number of successful extensions: 2682
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2682
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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