Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0830
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14394-1|CAA32567.1|  362|Drosophila melanogaster sodium channel...    29   5.7  
BT010210-1|AAQ23528.1|  711|Drosophila melanogaster RH61964p pro...    29   5.7  
AE014134-965|AAN10554.1|  711|Drosophila melanogaster CG11147-PB...    29   5.7  
AE014134-964|AAF52284.2|  711|Drosophila melanogaster CG11147-PA...    29   5.7  
AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA...    29   5.7  
AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB...    29   5.7  

>X14394-1|CAA32567.1|  362|Drosophila melanogaster sodium channel
           protein protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 246 VCMVCASNTWYVVCVMFSLLI*CIF*AL 329
           VC+  A+N ++  CVM ++L  CIF A+
Sbjct: 65  VCVYIATNQFFDYCVMATILFNCIFLAM 92


>BT010210-1|AAQ23528.1|  711|Drosophila melanogaster RH61964p
           protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 469 LSIYILIREAKTLYPFLRKLRGRRSMKFSTFIKNIEKKCTM 347
           LSI+I + + +  Y   RKLR     KFSTF++++ K C +
Sbjct: 454 LSIHIDMTDQQVAYFMQRKLRD----KFSTFMRSVVKDCNV 490


>AE014134-965|AAN10554.1|  711|Drosophila melanogaster CG11147-PB,
           isoform B protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 469 LSIYILIREAKTLYPFLRKLRGRRSMKFSTFIKNIEKKCTM 347
           LSI+I + + +  Y   RKLR     KFSTF++++ K C +
Sbjct: 454 LSIHIDMTDQQVAYFMQRKLRD----KFSTFMRSVVKDCNV 490


>AE014134-964|AAF52284.2|  711|Drosophila melanogaster CG11147-PA,
           isoform A protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 469 LSIYILIREAKTLYPFLRKLRGRRSMKFSTFIKNIEKKCTM 347
           LSI+I + + +  Y   RKLR     KFSTF++++ K C +
Sbjct: 454 LSIHIDMTDQQVAYFMQRKLRD----KFSTFMRSVVKDCNV 490


>AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA,
           isoform A protein.
          Length = 1618

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 246 VCMVCASNTWYVVCVMFSLLI*CIF*AL 329
           VC+  A+N ++  CVM ++L  CIF A+
Sbjct: 118 VCVYIATNQFFDYCVMATILFNCIFLAM 145


>AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB,
           isoform B protein.
          Length = 2327

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 246 VCMVCASNTWYVVCVMFSLLI*CIF*AL 329
           VC+  A+N ++  CVM ++L  CIF A+
Sbjct: 118 VCVYIATNQFFDYCVMATILFNCIFLAM 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,360,240
Number of Sequences: 53049
Number of extensions: 534163
Number of successful extensions: 1043
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)