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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0827
         (552 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3; ...    38   0.20 
UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=...    36   0.47 
UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3; Sophophor...    35   1.4  
UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora cras...    34   1.9  
UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  
UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1; Lac...    34   2.5  
UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in...    33   3.3  
UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein hea...    33   5.8  
UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA p...    33   5.8  
UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog;...    33   5.8  
UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2...    33   5.8  
UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4; Magnet...    32   7.7  
UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa (j...    32   7.7  
UniRef50_Q69RG4 Cluster: Putative uncharacterized protein P0493C...    32   7.7  
UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ...    32   7.7  
UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1; Schi...    32   7.7  

>UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3;
           Bradyrhizobiaceae|Rep: Putative uncharacterized protein
           - Bradyrhizobium sp. (strain ORS278)
          Length = 1268

 Score = 37.5 bits (83), Expect = 0.20
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +2

Query: 311 QHASADSVNGEKPRVHAQAQLDVP-SEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKV 487
           + A+A+  NGEKP+   Q +L  P SE + + ++ +         T P    A    P  
Sbjct: 322 EKATAEKPNGEKPKAAVQPELVPPTSETIAKEMKAEAKPAIAAPATEPAAEPAQAAAPAP 381

Query: 488 FHGAARLSSQARRPSAPQGHT 550
               A  +S+A +P AP+  T
Sbjct: 382 M--KAEAASEAPKPEAPKSET 400


>UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=1;
           Arabidopsis thaliana|Rep: Non-specific lipid-transfer
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 129

 Score = 36.3 bits (80), Expect = 0.47
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = -1

Query: 381 GTSSWA*ACTRGFSPFTESAEACCSSQRYKLAVCFYGIK-------TMESTCALPTPAPS 223
           G+SS + +C R FS   +S+  C  S        FYG K        + + C + TP+PS
Sbjct: 42  GSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPS 101

Query: 222 PLESAVFNFSN 190
              S   N+SN
Sbjct: 102 LCNSKKLNYSN 112


>UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2050

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
 Frame = -2

Query: 365  LERVPVVSHRSPSQLKRVALV-----RDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201
            +E+  +    SP  L+R A +     + T++P   M      Q V + PQ   +S PP +
Sbjct: 1473 VEQTGISPQTSPQSLQRTAFIPAPEMKQTTAPPPPMMKPP-QQNVPYLPQQDQNSMPPPA 1531

Query: 200  IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111
                 PPANQF  P    F    PP   +P
Sbjct: 1532 NKFAPPPANQFTPPPANQF--TAPPPAAKP 1559


>UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3;
            Sophophora|Rep: Zinc finger protein ush - Drosophila
            melanogaster (Fruit fly)
          Length = 1191

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +2

Query: 311  QHASADSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTP 481
            QH+++D  NGE P  H +++   P   V+ V EN+ S ++   + + P     +  P
Sbjct: 1033 QHSNSDVSNGEAPSFHIKSEPLDPPPTVNLVHENNNSPIATPHIKAEPIEVGADAAP 1089


>UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 969

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 23/90 (25%), Positives = 34/90 (37%)
 Frame = -2

Query: 380 ARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201
           ARP      P    R P       +V + +SP      R+  Q     P+H ++    +S
Sbjct: 686 ARPPPPPPPPRAVTRRPEGYDDEVMVYEPTSPGYTPQRRVIAQPEYVTPEHRVYRERAYS 745

Query: 200 IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111
             P APP+  +   R R  +   P    RP
Sbjct: 746 THPMAPPSGDYVPSRLRPVVETPPDYIARP 775


>UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1106a|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1106a)
          Length = 68

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +1

Query: 346 TTGTRSSPAGRAFGRCSPRPR 408
           TTG R  P GRA G C PRPR
Sbjct: 48  TTGARRPPLGRADGLCGPRPR 68


>UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1;
           Lactobacillus phage LL-H|Rep: Minor structural protein
           gp61 - Lactococcus delbrueckii bacteriophage LL-H
          Length = 505

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKVF 490
           P E V++ +  D S V  HD TSP   A Y+ T   F
Sbjct: 317 PDETVYQAMYGDASEVGFHDATSPIRVADYQATMDFF 353


>UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in
           the nucleotide excision repair of UV damage; n=1;
           Aspergillus niger|Rep: Function: S. pombe Rhp16 is
           involved in the nucleotide excision repair of UV damage
           - Aspergillus niger
          Length = 910

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -2

Query: 257 NQRVRFRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDA 105
           + R + RPQ+  H+  P    PT P  N F +PRR +F    P   +RP A
Sbjct: 63  HHRQQPRPQNPAHNGAPQYRPPTTPGPNSFSTPRREAF---DPFKPVRPSA 110


>UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 500

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 236 PQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPP 126
           P  H H+ PP + +P APP N+ +SP   +F  V PP
Sbjct: 117 PNGH-HAMPPLA-YPGAPPFNRQFSPNMMNFQMVPPP 151


>UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 211

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -2

Query: 224 LHSNPPFSIFPTAPPANQF--YSPRRRSFLNVGPPAHIRPDASS*VSARKSVDESI 63
           L  +P +S  P++PP + F  + P R S L++    H RP  S  VSA      S+
Sbjct: 20  LSPSPSYSPLPSSPPVSPFNQHPPPRTSSLSLSQSHHFRPHDSLPVSAHTDSHSSL 75


>UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein heavy
            chain, putative, partial; n=5; Strongylocentrotus
            purpuratus|Rep: PREDICTED: similar to dynein heavy chain,
            putative, partial - Strongylocentrotus purpuratus
          Length = 3881

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 389  GVHRVLENDGSHVSVHDVTSPPTAAAYEVTPK--VFHGAARLSSQARRPSAP 538
            G   VLE     +  H  +SPP +  Y ++P+   ++G +R S+   R S P
Sbjct: 1139 GCDSVLETIAEDLETHQTSSPPASTPYTMSPESTPYYGRSRASTGRTRTSRP 1190


>UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA
           protein - Triticum aestivum (Wheat)
          Length = 743

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVT--PKVFHGAARLSSQARRPSA 535
           PS        N GS  S+  +  P T+AA  VT  P++FHG   LSSQ   P++
Sbjct: 350 PSSMAPHQFNNFGSDNSMGLMGGPVTSAADNVTFRPQMFHGNGSLSSQTAVPTS 403


>UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog;
           n=1; Ostreococcus tauri|Rep: Ubiquitin-conjugating
           enzyme 9 homolog - Ostreococcus tauri
          Length = 353

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -2

Query: 221 HSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*VSARKSVDE 69
           H NP F   P A P++       R+  +  P AH R  A S V+AR+  +E
Sbjct: 59  HDNPSFHPHPRARPSSVAVKVHARTHRDAPPRAHPRVAAMSDVAARRLAEE 109


>UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2;
           Saccharomyces cerevisiae|Rep: Ubiquitin-like-specific
           protease 1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 621

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 237 TPAPSPLESAVFNFSNCSTGKSVLFSEASFVSECWATGA 121
           TP+ SP+ S     SNC +  S+ FS   F    W T A
Sbjct: 179 TPSTSPISSLASQKSNCDSDNSITFSRDPFGWNKWKTSA 217


>UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4;
           Magnetospirillum|Rep: 4-alpha-glucanotransferase -
           Magnetospirillum gryphiswaldense
          Length = 732

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 215 NPPFSIFPTAPPANQFYSPRRRSFLNVG 132
           NP  ++FPT P     Y+P  R FLNVG
Sbjct: 220 NPLHALFPTQPDKFSPYAPSSRRFLNVG 247


>UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 127

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
 Frame = -2

Query: 422 ESRHFRGRGEHLPKARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVR 243
           + R  RG G H   +    LE  P   HR  +    + L+    SP A    R       
Sbjct: 32  QGRQPRGCGGHTSTSPTPELELPPCSGHRGQAPAPVLGLLGRRGSPGAPPPPRSHPPVSY 91

Query: 242 FRPQHHL------HSNPPFSIFPTAPP 180
            RPQ         H  PPF I P APP
Sbjct: 92  VRPQPRPWPPPPPHPQPPFPISPVAPP 118


>UniRef50_Q69RG4 Cluster: Putative uncharacterized protein
           P0493C06.2; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0493C06.2 - Oryza sativa subsp. japonica (Rice)
          Length = 192

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -2

Query: 389 LPKARPAGLERVPVVSHRSPSQLKRVA-LVRDTSSPFAFMASRLWNQRVRFRPQHHLHSN 213
           LP   P     V  V+   P++    A L R T+   A  +SR   +R  F P+HH  S+
Sbjct: 91  LPTNCPPPRHAVAAVALTEPARTSAAASLPRITAG--ALFSSRAGCRRRPFAPRHH-RSS 147

Query: 212 PPFSIFPTAPPANQFYSP 159
           PPFS F    PA  F +P
Sbjct: 148 PPFSSF---APAAVFAAP 162


>UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 986

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = -2

Query: 224 LHSNPPFS-IFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*V---SARKSVDESIAL 57
           L S PP S + P++PP    + P R   L++ P +  RPD  S V   +AR +   S++L
Sbjct: 613 LPSPPPTSSVAPSSPPIASLHKPSRSPLLSLPPSSPPRPDIFSPVPSQAARPTPSPSVSL 672


>UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1;
           Schizosaccharomyces pombe|Rep: Poly(A) binding protein
           Nab2 - Schizosaccharomyces pombe (Fission yeast)
          Length = 307

 Score = 32.3 bits (70), Expect = 7.7
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -1

Query: 306 SQRYKLAVCFYGIKTMESTC--ALPTPAPSPLESAVFNFSNCSTGK 175
           +Q  ++ +C Y  K   + C  A PTPA +P E  V +   C++GK
Sbjct: 176 TQTQEVPLCKYADKCSRANCIFAHPTPAAAPGEGMVLSSEMCASGK 221


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,448,391
Number of Sequences: 1657284
Number of extensions: 12092760
Number of successful extensions: 40997
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40937
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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