Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0827
(552 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.20
UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=... 36 0.47
UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3; Sophophor... 35 1.4
UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora cras... 34 1.9
UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1; Lac... 34 2.5
UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in... 33 3.3
UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein hea... 33 5.8
UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA p... 33 5.8
UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog;... 33 5.8
UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2... 33 5.8
UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4; Magnet... 32 7.7
UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa (j... 32 7.7
UniRef50_Q69RG4 Cluster: Putative uncharacterized protein P0493C... 32 7.7
UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7
UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1; Schi... 32 7.7
>UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3;
Bradyrhizobiaceae|Rep: Putative uncharacterized protein
- Bradyrhizobium sp. (strain ORS278)
Length = 1268
Score = 37.5 bits (83), Expect = 0.20
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 311 QHASADSVNGEKPRVHAQAQLDVP-SEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKV 487
+ A+A+ NGEKP+ Q +L P SE + + ++ + T P A P
Sbjct: 322 EKATAEKPNGEKPKAAVQPELVPPTSETIAKEMKAEAKPAIAAPATEPAAEPAQAAAPAP 381
Query: 488 FHGAARLSSQARRPSAPQGHT 550
A +S+A +P AP+ T
Sbjct: 382 M--KAEAASEAPKPEAPKSET 400
>UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=1;
Arabidopsis thaliana|Rep: Non-specific lipid-transfer
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 36.3 bits (80), Expect = 0.47
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = -1
Query: 381 GTSSWA*ACTRGFSPFTESAEACCSSQRYKLAVCFYGIK-------TMESTCALPTPAPS 223
G+SS + +C R FS +S+ C S FYG K + + C + TP+PS
Sbjct: 42 GSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPS 101
Query: 222 PLESAVFNFSN 190
S N+SN
Sbjct: 102 LCNSKKLNYSN 112
>UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2050
Score = 34.7 bits (76), Expect = 1.4
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = -2
Query: 365 LERVPVVSHRSPSQLKRVALV-----RDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201
+E+ + SP L+R A + + T++P M Q V + PQ +S PP +
Sbjct: 1473 VEQTGISPQTSPQSLQRTAFIPAPEMKQTTAPPPPMMKPP-QQNVPYLPQQDQNSMPPPA 1531
Query: 200 IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111
PPANQF P F PP +P
Sbjct: 1532 NKFAPPPANQFTPPPANQF--TAPPPAAKP 1559
>UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3;
Sophophora|Rep: Zinc finger protein ush - Drosophila
melanogaster (Fruit fly)
Length = 1191
Score = 34.7 bits (76), Expect = 1.4
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 311 QHASADSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTP 481
QH+++D NGE P H +++ P V+ V EN+ S ++ + + P + P
Sbjct: 1033 QHSNSDVSNGEAPSFHIKSEPLDPPPTVNLVHENNNSPIATPHIKAEPIEVGADAAP 1089
>UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 969
Score = 34.3 bits (75), Expect = 1.9
Identities = 23/90 (25%), Positives = 34/90 (37%)
Frame = -2
Query: 380 ARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201
ARP P R P +V + +SP R+ Q P+H ++ +S
Sbjct: 686 ARPPPPPPPPRAVTRRPEGYDDEVMVYEPTSPGYTPQRRVIAQPEYVTPEHRVYRERAYS 745
Query: 200 IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111
P APP+ + R R + P RP
Sbjct: 746 THPMAPPSGDYVPSRLRPVVETPPDYIARP 775
>UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1106a|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1106a)
Length = 68
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +1
Query: 346 TTGTRSSPAGRAFGRCSPRPR 408
TTG R P GRA G C PRPR
Sbjct: 48 TTGARRPPLGRADGLCGPRPR 68
>UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1;
Lactobacillus phage LL-H|Rep: Minor structural protein
gp61 - Lactococcus delbrueckii bacteriophage LL-H
Length = 505
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKVF 490
P E V++ + D S V HD TSP A Y+ T F
Sbjct: 317 PDETVYQAMYGDASEVGFHDATSPIRVADYQATMDFF 353
>UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in
the nucleotide excision repair of UV damage; n=1;
Aspergillus niger|Rep: Function: S. pombe Rhp16 is
involved in the nucleotide excision repair of UV damage
- Aspergillus niger
Length = 910
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 257 NQRVRFRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDA 105
+ R + RPQ+ H+ P PT P N F +PRR +F P +RP A
Sbjct: 63 HHRQQPRPQNPAHNGAPQYRPPTTPGPNSFSTPRREAF---DPFKPVRPSA 110
>UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 500
Score = 33.1 bits (72), Expect = 4.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 236 PQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPP 126
P H H+ PP + +P APP N+ +SP +F V PP
Sbjct: 117 PNGH-HAMPPLA-YPGAPPFNRQFSPNMMNFQMVPPP 151
>UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 211
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 224 LHSNPPFSIFPTAPPANQF--YSPRRRSFLNVGPPAHIRPDASS*VSARKSVDESI 63
L +P +S P++PP + F + P R S L++ H RP S VSA S+
Sbjct: 20 LSPSPSYSPLPSSPPVSPFNQHPPPRTSSLSLSQSHHFRPHDSLPVSAHTDSHSSL 75
>UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein heavy
chain, putative, partial; n=5; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to dynein heavy chain,
putative, partial - Strongylocentrotus purpuratus
Length = 3881
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 389 GVHRVLENDGSHVSVHDVTSPPTAAAYEVTPK--VFHGAARLSSQARRPSAP 538
G VLE + H +SPP + Y ++P+ ++G +R S+ R S P
Sbjct: 1139 GCDSVLETIAEDLETHQTSSPPASTPYTMSPESTPYYGRSRASTGRTRTSRP 1190
>UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA
protein - Triticum aestivum (Wheat)
Length = 743
Score = 32.7 bits (71), Expect = 5.8
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVT--PKVFHGAARLSSQARRPSA 535
PS N GS S+ + P T+AA VT P++FHG LSSQ P++
Sbjct: 350 PSSMAPHQFNNFGSDNSMGLMGGPVTSAADNVTFRPQMFHGNGSLSSQTAVPTS 403
>UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog;
n=1; Ostreococcus tauri|Rep: Ubiquitin-conjugating
enzyme 9 homolog - Ostreococcus tauri
Length = 353
Score = 32.7 bits (71), Expect = 5.8
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2
Query: 221 HSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*VSARKSVDE 69
H NP F P A P++ R+ + P AH R A S V+AR+ +E
Sbjct: 59 HDNPSFHPHPRARPSSVAVKVHARTHRDAPPRAHPRVAAMSDVAARRLAEE 109
>UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2;
Saccharomyces cerevisiae|Rep: Ubiquitin-like-specific
protease 1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 621
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 237 TPAPSPLESAVFNFSNCSTGKSVLFSEASFVSECWATGA 121
TP+ SP+ S SNC + S+ FS F W T A
Sbjct: 179 TPSTSPISSLASQKSNCDSDNSITFSRDPFGWNKWKTSA 217
>UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4;
Magnetospirillum|Rep: 4-alpha-glucanotransferase -
Magnetospirillum gryphiswaldense
Length = 732
Score = 32.3 bits (70), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 215 NPPFSIFPTAPPANQFYSPRRRSFLNVG 132
NP ++FPT P Y+P R FLNVG
Sbjct: 220 NPLHALFPTQPDKFSPYAPSSRRFLNVG 247
>UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice)
Length = 127
Score = 32.3 bits (70), Expect = 7.7
Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Frame = -2
Query: 422 ESRHFRGRGEHLPKARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVR 243
+ R RG G H + LE P HR + + L+ SP A R
Sbjct: 32 QGRQPRGCGGHTSTSPTPELELPPCSGHRGQAPAPVLGLLGRRGSPGAPPPPRSHPPVSY 91
Query: 242 FRPQHHL------HSNPPFSIFPTAPP 180
RPQ H PPF I P APP
Sbjct: 92 VRPQPRPWPPPPPHPQPPFPISPVAPP 118
>UniRef50_Q69RG4 Cluster: Putative uncharacterized protein
P0493C06.2; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0493C06.2 - Oryza sativa subsp. japonica (Rice)
Length = 192
Score = 32.3 bits (70), Expect = 7.7
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -2
Query: 389 LPKARPAGLERVPVVSHRSPSQLKRVA-LVRDTSSPFAFMASRLWNQRVRFRPQHHLHSN 213
LP P V V+ P++ A L R T+ A +SR +R F P+HH S+
Sbjct: 91 LPTNCPPPRHAVAAVALTEPARTSAAASLPRITAG--ALFSSRAGCRRRPFAPRHH-RSS 147
Query: 212 PPFSIFPTAPPANQFYSP 159
PPFS F PA F +P
Sbjct: 148 PPFSSF---APAAVFAAP 162
>UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 986
Score = 32.3 bits (70), Expect = 7.7
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 224 LHSNPPFS-IFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*V---SARKSVDESIAL 57
L S PP S + P++PP + P R L++ P + RPD S V +AR + S++L
Sbjct: 613 LPSPPPTSSVAPSSPPIASLHKPSRSPLLSLPPSSPPRPDIFSPVPSQAARPTPSPSVSL 672
>UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1;
Schizosaccharomyces pombe|Rep: Poly(A) binding protein
Nab2 - Schizosaccharomyces pombe (Fission yeast)
Length = 307
Score = 32.3 bits (70), Expect = 7.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 306 SQRYKLAVCFYGIKTMESTC--ALPTPAPSPLESAVFNFSNCSTGK 175
+Q ++ +C Y K + C A PTPA +P E V + C++GK
Sbjct: 176 TQTQEVPLCKYADKCSRANCIFAHPTPAAAPGEGMVLSSEMCASGK 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,448,391
Number of Sequences: 1657284
Number of extensions: 12092760
Number of successful extensions: 40997
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40937
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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