BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0827 (552 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.20 UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=... 36 0.47 UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4 UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3; Sophophor... 35 1.4 UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora cras... 34 1.9 UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5 UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1; Lac... 34 2.5 UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in... 33 3.3 UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4 UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4 UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein hea... 33 5.8 UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA p... 33 5.8 UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog;... 33 5.8 UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2... 33 5.8 UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4; Magnet... 32 7.7 UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa (j... 32 7.7 UniRef50_Q69RG4 Cluster: Putative uncharacterized protein P0493C... 32 7.7 UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7 UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1; Schi... 32 7.7 >UniRef50_A4YXV3 Cluster: Putative uncharacterized protein; n=3; Bradyrhizobiaceae|Rep: Putative uncharacterized protein - Bradyrhizobium sp. (strain ORS278) Length = 1268 Score = 37.5 bits (83), Expect = 0.20 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 311 QHASADSVNGEKPRVHAQAQLDVP-SEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKV 487 + A+A+ NGEKP+ Q +L P SE + + ++ + T P A P Sbjct: 322 EKATAEKPNGEKPKAAVQPELVPPTSETIAKEMKAEAKPAIAAPATEPAAEPAQAAAPAP 381 Query: 488 FHGAARLSSQARRPSAPQGHT 550 A +S+A +P AP+ T Sbjct: 382 M--KAEAASEAPKPEAPKSET 400 >UniRef50_Q9SA59 Cluster: Non-specific lipid-transfer protein; n=1; Arabidopsis thaliana|Rep: Non-specific lipid-transfer protein - Arabidopsis thaliana (Mouse-ear cress) Length = 129 Score = 36.3 bits (80), Expect = 0.47 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Frame = -1 Query: 381 GTSSWA*ACTRGFSPFTESAEACCSSQRYKLAVCFYGIK-------TMESTCALPTPAPS 223 G+SS + +C R FS +S+ C S FYG K + + C + TP+PS Sbjct: 42 GSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPS 101 Query: 222 PLESAVFNFSN 190 S N+SN Sbjct: 102 LCNSKKLNYSN 112 >UniRef50_A2DI73 Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3 Length = 2050 Score = 34.7 bits (76), Expect = 1.4 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 5/90 (5%) Frame = -2 Query: 365 LERVPVVSHRSPSQLKRVALV-----RDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201 +E+ + SP L+R A + + T++P M Q V + PQ +S PP + Sbjct: 1473 VEQTGISPQTSPQSLQRTAFIPAPEMKQTTAPPPPMMKPP-QQNVPYLPQQDQNSMPPPA 1531 Query: 200 IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111 PPANQF P F PP +P Sbjct: 1532 NKFAPPPANQFTPPPANQF--TAPPPAAKP 1559 >UniRef50_Q9VPQ6 Cluster: Zinc finger protein ush; n=3; Sophophora|Rep: Zinc finger protein ush - Drosophila melanogaster (Fruit fly) Length = 1191 Score = 34.7 bits (76), Expect = 1.4 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +2 Query: 311 QHASADSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTP 481 QH+++D NGE P H +++ P V+ V EN+ S ++ + + P + P Sbjct: 1033 QHSNSDVSNGEAPSFHIKSEPLDPPPTVNLVHENNNSPIATPHIKAEPIEVGADAAP 1089 >UniRef50_Q7S8C0 Cluster: Predicted protein; n=1; Neurospora crassa|Rep: Predicted protein - Neurospora crassa Length = 969 Score = 34.3 bits (75), Expect = 1.9 Identities = 23/90 (25%), Positives = 34/90 (37%) Frame = -2 Query: 380 ARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVRFRPQHHLHSNPPFS 201 ARP P R P +V + +SP R+ Q P+H ++ +S Sbjct: 686 ARPPPPPPPPRAVTRRPEGYDDEVMVYEPTSPGYTPQRRVIAQPEYVTPEHRVYRERAYS 745 Query: 200 IFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111 P APP+ + R R + P RP Sbjct: 746 THPMAPPSGDYVPSRLRPVVETPPDYIARP 775 >UniRef50_A3P2P8 Cluster: Putative uncharacterized protein; n=1; Burkholderia pseudomallei 1106a|Rep: Putative uncharacterized protein - Burkholderia pseudomallei (strain 1106a) Length = 68 Score = 33.9 bits (74), Expect = 2.5 Identities = 14/21 (66%), Positives = 14/21 (66%) Frame = +1 Query: 346 TTGTRSSPAGRAFGRCSPRPR 408 TTG R P GRA G C PRPR Sbjct: 48 TTGARRPPLGRADGLCGPRPR 68 >UniRef50_Q38341 Cluster: Minor structural protein gp61; n=1; Lactobacillus phage LL-H|Rep: Minor structural protein gp61 - Lactococcus delbrueckii bacteriophage LL-H Length = 505 Score = 33.9 bits (74), Expect = 2.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKVF 490 P E V++ + D S V HD TSP A Y+ T F Sbjct: 317 PDETVYQAMYGDASEVGFHDATSPIRVADYQATMDFF 353 >UniRef50_A2QWZ3 Cluster: Function: S. pombe Rhp16 is involved in the nucleotide excision repair of UV damage; n=1; Aspergillus niger|Rep: Function: S. pombe Rhp16 is involved in the nucleotide excision repair of UV damage - Aspergillus niger Length = 910 Score = 33.5 bits (73), Expect = 3.3 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -2 Query: 257 NQRVRFRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDA 105 + R + RPQ+ H+ P PT P N F +PRR +F P +RP A Sbjct: 63 HHRQQPRPQNPAHNGAPQYRPPTTPGPNSFSTPRREAF---DPFKPVRPSA 110 >UniRef50_A7ATL7 Cluster: Putative uncharacterized protein; n=1; Babesia bovis|Rep: Putative uncharacterized protein - Babesia bovis Length = 500 Score = 33.1 bits (72), Expect = 4.4 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -2 Query: 236 PQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPP 126 P H H+ PP + +P APP N+ +SP +F V PP Sbjct: 117 PNGH-HAMPPLA-YPGAPPFNRQFSPNMMNFQMVPPP 151 >UniRef50_Q5KHV0 Cluster: Putative uncharacterized protein; n=1; Filobasidiella neoformans|Rep: Putative uncharacterized protein - Cryptococcus neoformans (Filobasidiella neoformans) Length = 211 Score = 33.1 bits (72), Expect = 4.4 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = -2 Query: 224 LHSNPPFSIFPTAPPANQF--YSPRRRSFLNVGPPAHIRPDASS*VSARKSVDESI 63 L +P +S P++PP + F + P R S L++ H RP S VSA S+ Sbjct: 20 LSPSPSYSPLPSSPPVSPFNQHPPPRTSSLSLSQSHHFRPHDSLPVSAHTDSHSSL 75 >UniRef50_UPI0000E46CD7 Cluster: PREDICTED: similar to dynein heavy chain, putative, partial; n=5; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to dynein heavy chain, putative, partial - Strongylocentrotus purpuratus Length = 3881 Score = 32.7 bits (71), Expect = 5.8 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 389 GVHRVLENDGSHVSVHDVTSPPTAAAYEVTPK--VFHGAARLSSQARRPSAP 538 G VLE + H +SPP + Y ++P+ ++G +R S+ R S P Sbjct: 1139 GCDSVLETIAEDLETHQTSSPPASTPYTMSPESTPYYGRSRASTGRTRTSRP 1190 >UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA protein - Triticum aestivum (Wheat) Length = 743 Score = 32.7 bits (71), Expect = 5.8 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +2 Query: 380 PSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVT--PKVFHGAARLSSQARRPSA 535 PS N GS S+ + P T+AA VT P++FHG LSSQ P++ Sbjct: 350 PSSMAPHQFNNFGSDNSMGLMGGPVTSAADNVTFRPQMFHGNGSLSSQTAVPTS 403 >UniRef50_Q015S3 Cluster: Ubiquitin-conjugating enzyme 9 homolog; n=1; Ostreococcus tauri|Rep: Ubiquitin-conjugating enzyme 9 homolog - Ostreococcus tauri Length = 353 Score = 32.7 bits (71), Expect = 5.8 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -2 Query: 221 HSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*VSARKSVDE 69 H NP F P A P++ R+ + P AH R A S V+AR+ +E Sbjct: 59 HDNPSFHPHPRARPSSVAVKVHARTHRDAPPRAHPRVAAMSDVAARRLAEE 109 >UniRef50_Q02724 Cluster: Ubiquitin-like-specific protease 1; n=2; Saccharomyces cerevisiae|Rep: Ubiquitin-like-specific protease 1 - Saccharomyces cerevisiae (Baker's yeast) Length = 621 Score = 32.7 bits (71), Expect = 5.8 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -1 Query: 237 TPAPSPLESAVFNFSNCSTGKSVLFSEASFVSECWATGA 121 TP+ SP+ S SNC + S+ FS F W T A Sbjct: 179 TPSTSPISSLASQKSNCDSDNSITFSRDPFGWNKWKTSA 217 >UniRef50_A4TYX9 Cluster: 4-alpha-glucanotransferase; n=4; Magnetospirillum|Rep: 4-alpha-glucanotransferase - Magnetospirillum gryphiswaldense Length = 732 Score = 32.3 bits (70), Expect = 7.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -2 Query: 215 NPPFSIFPTAPPANQFYSPRRRSFLNVG 132 NP ++FPT P Y+P R FLNVG Sbjct: 220 NPLHALFPTQPDKFSPYAPSSRRFLNVG 247 >UniRef50_Q7XCZ4 Cluster: Expressed protein; n=1; Oryza sativa (japonica cultivar-group)|Rep: Expressed protein - Oryza sativa subsp. japonica (Rice) Length = 127 Score = 32.3 bits (70), Expect = 7.7 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 6/87 (6%) Frame = -2 Query: 422 ESRHFRGRGEHLPKARPAGLERVPVVSHRSPSQLKRVALVRDTSSPFAFMASRLWNQRVR 243 + R RG G H + LE P HR + + L+ SP A R Sbjct: 32 QGRQPRGCGGHTSTSPTPELELPPCSGHRGQAPAPVLGLLGRRGSPGAPPPPRSHPPVSY 91 Query: 242 FRPQHHL------HSNPPFSIFPTAPP 180 RPQ H PPF I P APP Sbjct: 92 VRPQPRPWPPPPPHPQPPFPISPVAPP 118 >UniRef50_Q69RG4 Cluster: Putative uncharacterized protein P0493C06.2; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein P0493C06.2 - Oryza sativa subsp. japonica (Rice) Length = 192 Score = 32.3 bits (70), Expect = 7.7 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -2 Query: 389 LPKARPAGLERVPVVSHRSPSQLKRVA-LVRDTSSPFAFMASRLWNQRVRFRPQHHLHSN 213 LP P V V+ P++ A L R T+ A +SR +R F P+HH S+ Sbjct: 91 LPTNCPPPRHAVAAVALTEPARTSAAASLPRITAG--ALFSSRAGCRRRPFAPRHH-RSS 147 Query: 212 PPFSIFPTAPPANQFYSP 159 PPFS F PA F +P Sbjct: 148 PPFSSF---APAAVFAAP 162 >UniRef50_Q55S59 Cluster: Putative uncharacterized protein; n=2; Filobasidiella neoformans|Rep: Putative uncharacterized protein - Cryptococcus neoformans (Filobasidiella neoformans) Length = 986 Score = 32.3 bits (70), Expect = 7.7 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%) Frame = -2 Query: 224 LHSNPPFS-IFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*V---SARKSVDESIAL 57 L S PP S + P++PP + P R L++ P + RPD S V +AR + S++L Sbjct: 613 LPSPPPTSSVAPSSPPIASLHKPSRSPLLSLPPSSPPRPDIFSPVPSQAARPTPSPSVSL 672 >UniRef50_O13713 Cluster: Poly(A) binding protein Nab2; n=1; Schizosaccharomyces pombe|Rep: Poly(A) binding protein Nab2 - Schizosaccharomyces pombe (Fission yeast) Length = 307 Score = 32.3 bits (70), Expect = 7.7 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = -1 Query: 306 SQRYKLAVCFYGIKTMESTC--ALPTPAPSPLESAVFNFSNCSTGK 175 +Q ++ +C Y K + C A PTPA +P E V + C++GK Sbjct: 176 TQTQEVPLCKYADKCSRANCIFAHPTPAAAPGEGMVLSSEMCASGK 221 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 578,448,391 Number of Sequences: 1657284 Number of extensions: 12092760 Number of successful extensions: 40997 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 38941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 40937 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 36238783989 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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