Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0827
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.58 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.2  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.5  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 276 YGIKTMESTCALPTPAPSPLESAVFNFSNCSTGKSVLFSEASF 148
           Y I     TC+  + +P+P  S+  +FS  S+  + ++ + +F
Sbjct: 187 YQILLPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENF 229


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 341 EKPRVHAQAQLDVPSEGV 394
           +K R H    L++PSEG+
Sbjct: 372 DKQRTHQPFLLNIPSEGI 389


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 103 LASGLMCAGGPTFRNERRL 159
           L +GL+ + GP ++N R++
Sbjct: 111 LGTGLLTSAGPKWQNRRKI 129


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 103 LASGLMCAGGPTFRNERRL 159
           L +GL+ + GP ++N R++
Sbjct: 111 LGTGLLTSRGPKWQNRRKI 129


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 443 TSPPTAAAYEVTPKVFHGAARLSSQARRPSAPQGH 547
           T P  AAA  + P+    AA L++ A   +A Q H
Sbjct: 128 TLPAAAAAALLPPQTAAMAAYLNAAAVAAAAQQSH 162


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  HFQNSVTYAGNHGST 58
           HF NSVT   NH  T
Sbjct: 69  HFDNSVTPMVNHDFT 83


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 270 IKTMESTCALPTPAPSPLESAVFNFSN 190
           +K  E+   +PT A +PL+S+ F+ S+
Sbjct: 2   VKREETILVIPTMARTPLKSS-FSISS 27


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  HFQNSVTYAGNHGST 58
           HF NSVT   NH  T
Sbjct: 69  HFDNSVTPMVNHDFT 83


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 14  HFQNSVTYAGNHGST 58
           HF NSVT   NH  T
Sbjct: 69  HFDNSVTPMVNHDFT 83


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 445 CNVMHADMRAVIFEDAVNTF 386
           C   H D++  IFE+   TF
Sbjct: 11  CIACHPDIQERIFEEIEETF 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,203
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)