Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0827
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0641 + 25749091-25749207,25749520-25749666,25750580-257507... 31 0.81
01_01_0418 - 3142659-3145622 30 1.4
07_03_0863 - 22087178-22087474,22087614-22087770,22087851-220880... 29 1.9
01_01_0424 + 3200223-3200634,3200677-3200836,3200987-3201342,320... 29 1.9
01_01_0407 - 3067071-3070085 29 1.9
12_01_0731 - 6516894-6517473,6517485-6519574 29 2.5
12_01_0715 - 6230393-6231559,6233234-6234553 29 2.5
01_01_0421 + 3181139-3184207 29 2.5
11_04_0444 + 17816207-17817436 29 3.3
08_02_0542 + 18374810-18375694,18375781-18376098 29 3.3
07_03_0769 - 21372771-21373031,21373171-21373327,21373413-213736... 29 3.3
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 29 3.3
12_01_0741 + 6649988-6653065 28 4.3
10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430 28 4.3
01_01_0423 + 3198075-3199010 28 4.3
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 28 5.7
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 28 5.7
03_03_0116 - 14572258-14572881,14573026-14573127,14573253-145733... 28 5.7
12_01_0730 + 6505759-6508806 27 7.5
11_06_0257 + 21746643-21748091 27 7.5
11_01_0726 - 5990764-5990834,5990916-5990985,5991096-5991243,599... 27 7.5
08_01_1010 - 10215625-10216335,10216372-10216473 27 7.5
08_01_0168 - 1385439-1385979,1386081-1387438 27 7.5
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 27 7.5
04_04_0236 + 23825368-23825763,23826229-23828667 27 7.5
04_01_0280 - 3757107-3758180 27 7.5
01_01_0350 + 2782189-2782650,2783778-2783798,2787172-2787690,278... 27 7.5
12_01_0714 + 6223269-6226250 27 10.0
11_01_0407 + 3090880-3092010 27 10.0
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668... 27 10.0
07_01_0245 - 1803170-1803887,1803971-1804641 27 10.0
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 27 10.0
03_06_0122 - 31815023-31816357 27 10.0
>11_06_0641 +
25749091-25749207,25749520-25749666,25750580-25750761,
25750851-25750884
Length = 159
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 216 ESAVFNFSNCSTGKSVLFSEASFVSECWATGAH 118
ES VF F STG S+L S + +CW+ G H
Sbjct: 48 ESLVFKFKMVSTGLSILTS----IYDCWSFGTH 76
>01_01_0418 - 3142659-3145622
Length = 987
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HGS SI +L+ L LN SH AL P+
Sbjct: 822 HGSIPKSIGELVLLRGLNMSHNALTGPI 849
>07_03_0863 -
22087178-22087474,22087614-22087770,22087851-22088088,
22088181-22088352
Length = 287
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 258 ESTCALPTPAPSPLESAVFNFSNCSTGKSVLFS 160
++TC+LP PAP P S + S STG S +S
Sbjct: 247 DATCSLPAPAPRP-TSLIDGSSGYSTGYSTEWS 278
>01_01_0424 +
3200223-3200634,3200677-3200836,3200987-3201342,
3201958-3203252
Length = 740
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HGS SI +L+ L LN SH +L PV
Sbjct: 581 HGSIPESIGELVLLHALNMSHNSLTGPV 608
>01_01_0407 - 3067071-3070085
Length = 1004
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HGS +I +L+ L +LN SH +L P+
Sbjct: 845 HGSLPEAIGELVLLNVLNISHNSLTGPI 872
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HG SI +L+ L LN SH AL P+
Sbjct: 837 HGRIPRSIGELVLLRALNMSHNALTGPI 864
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HG SI +L+ L LN SH AL P+
Sbjct: 776 HGRIPRSIGELVLLRALNMSHNALTGPI 803
>01_01_0421 + 3181139-3184207
Length = 1022
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HGS +I +L+ L LN SH +L PV
Sbjct: 864 HGSVPKAIGELVLLNTLNMSHNSLTGPV 891
>11_04_0444 + 17816207-17817436
Length = 409
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -2
Query: 287 PFAFMASRLWNQRVRFRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRP 111
PF S L NQ + + N P + FPT+ P N F ++F GPP++ +P
Sbjct: 3 PFKGNFSNLLNQGSSSQATNSDAQNSPSTQFPTSYPQN-FRPSFLQNFHPFGPPSNYQP 60
>08_02_0542 + 18374810-18375694,18375781-18376098
Length = 400
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 215 NPP---FSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPD 108
NPP +++ + PP Q SPR+ + G PA IRPD
Sbjct: 291 NPPPQEYTLMKSDPPVTQRRSPRQHTVQGGGGPA-IRPD 328
>07_03_0769 -
21372771-21373031,21373171-21373327,21373413-21373650,
21373745-21373916
Length = 275
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 258 ESTCALPTPAPSPLESAVFNFSNCSTGKS 172
++TC LP PAP P S++ S STG S
Sbjct: 247 DATCPLPVPAPRP-TSSIDGSSGYSTGYS 274
>01_06_1699 - 39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 335 NGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKVFHGAAR 505
+G+ +HA ++ PSEG + + D S + VHD+ S + E P +F G R
Sbjct: 1183 SGKSTLIHALFRIVEPSEGRILIDDVDISLLGVHDLRSRLSVIPQE--PTLFQGTVR 1237
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV------AQHSETNDASENKTDLPVEQ 190
HG+ I +L+ L LN SH L P+ + ET D S NK + Q
Sbjct: 858 HGNIPAGIEELVLLHGLNMSHNVLTGPIPTQFGKLDNLETLDLSSNKLSGEIPQ 911
>10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430
Length = 156
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 242 FRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSF 144
F +HHL + PP + P++PP Q+ + + R F
Sbjct: 42 FSSRHHLLT-PPLGLHPSSPPPMQWQTQQVRHF 73
>01_01_0423 + 3198075-3199010
Length = 311
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPV 130
HGS S+ +L+ L LN SH +L P+
Sbjct: 152 HGSIPKSMGELVLLHTLNMSHNSLTGPI 179
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -2
Query: 422 ESRHFRGRGEHLPKARPAGLERVPVVSHRSPS---QLKRVALVRDTSSPF 282
ESRH R P PA L R P +SH S +L AL ++PF
Sbjct: 62 ESRHRRVLRPFRPDLLPAALARYPAISHLDLSLCPRLPDAALAALPAAPF 111
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 270 CHKSKRRACISD*SNTLQLTR*TVRNHGYTLKPSWTCLRKVFTASSKMTALM 425
CHKSK+++ ++D + +LTR +V+ L+ R + + S T L+
Sbjct: 159 CHKSKKKSVMTDATEETKLTRFSVKYFSEVLEKLSKRHRDIISKSCFKTLLL 210
>03_03_0116 -
14572258-14572881,14573026-14573127,14573253-14573345,
14573445-14573591,14573690-14573780,14573873-14573961,
14574061-14574126,14574241-14574762
Length = 577
Score = 27.9 bits (59), Expect = 5.7
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = -2
Query: 422 ESRHFRGRGEHLPKARPAGLERVPVVSHRSPSQL-KRVALVRDTSSPFAFMASRLWNQRV 246
E G GE P R LER+ QL K+++ T + R + +
Sbjct: 456 EEEDQEGGGEQAPVPREKILERINSKKGMRSYQLGKQLSFRWTTGAGPRIGCVRDYPSEL 515
Query: 245 RFRPQHHLHSNPPFSIFPTAPPANQFYSPRRRSFLNVGPPA 123
+ R ++ +P + +A +++F SP+RRSF PA
Sbjct: 516 QLRALEQVNLSPRSAAAASA--SSRFSSPQRRSFNGAAAPA 554
>12_01_0730 + 6505759-6508806
Length = 1015
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 47 HGSTMLSIRQLIFLLILNYSHRALCAPVAQHSETNDASENKTDLPVEQL 193
HG+ +I +L+ L LN SH AL P+ D E+ DL +L
Sbjct: 862 HGAIPDTIGELVLLRGLNLSHNALTGPIPSQFGRLDQLES-LDLSFNEL 909
>11_06_0257 + 21746643-21748091
Length = 482
Score = 27.5 bits (58), Expect = 7.5
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = -1
Query: 468 YAAAVGGDVTSCT--LT*EPSFSRTR*TPSEGTSSWA*ACTRGFSPFTESAEACCSSQRY 295
+AAA GGD +C L P + P + +W + G C +
Sbjct: 195 HAAAGGGDAAACVVLLLHMPRCELSYARPGDERWTWI---SPGAGTGLRWRNLYCDAAYC 251
Query: 294 KLAVCFYGIKTMESTCALPTPAPSPLESAVFNFSNCST 181
K FY ++ +S AL PSP+ VF+ ST
Sbjct: 252 KDDGLFYVVRDDDSVHALDLTGPSPVARKVFDERTWST 289
>11_01_0726 -
5990764-5990834,5990916-5990985,5991096-5991243,
5991320-5991432,5991695-5991766,5991857-5991984,
5992290-5992485,5992758-5992937,5993032-5993172,
5993408-5993572,5993952-5994098,5994205-5994294,
5994417-5994623,5994673-5995028,5995374-5995506
Length = 738
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 294 CISD*SNTLQLTR*TV-----RNHGYTLKPSWTCLRKVFTASSKMTALMSACM 437
C S S ++Q +R + R+HGY SW C R+ T+ M A + +
Sbjct: 56 CTSSVSGSVQWSRISAFDCRTRSHGYASSSSWVCQRRRKTSFYVMNAASTGAL 108
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 443 TSPPTAAAYEVTPKVFHGAARLSSQARRPSAPQGH 547
T PP AA+ + TP R +S PS PQ H
Sbjct: 123 TPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRH 157
>08_01_0168 - 1385439-1385979,1386081-1387438
Length = 632
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 297 YKLAVCFYGIKTMESTCALPTPAPSPLESAVFNFSNCST 181
+ L C G+ S C L PA P+ + FN+SN S+
Sbjct: 4 FSLTTCATGLVIFFSVCYLQPPA--PVAALSFNYSNFSS 40
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +2
Query: 374 DVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYEVTPKVFHGAARLSSQARRPSAPQGHT 550
D+P ++ ++ + +S +S PT++ E H + + + +PS PQ +T
Sbjct: 1019 DLPFRSNKKIFDSQMAAMSQEKSSSSPTSSIVESYANKLHYPSEVLHEKTKPSGPQHNT 1077
>04_04_0236 + 23825368-23825763,23826229-23828667
Length = 944
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 305 LEQHASADSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAAAYE 472
+ + S D ++ +A++ L + EN+ S + HD+TSP +E
Sbjct: 133 VSDYPSVDVMDTHHSDQYAKSSLQLQFRDTSVSFENNNSVLDKHDITSPQVGMTFE 188
>04_01_0280 - 3757107-3758180
Length = 357
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 209 PFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPD 108
P SIF + P +FY P S + P IRP+
Sbjct: 3 PLSIFQLSAPRGEFYEPPPSSEPILTPSYEIRPE 36
>01_01_0350 +
2782189-2782650,2783778-2783798,2787172-2787690,
2787780-2788015,2788110-2788242,2788482-2788547,
2789200-2789454
Length = 563
Score = 27.5 bits (58), Expect = 7.5
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 VNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVS---VHDVTSPPTAAAYEVTPKVFHGAA 502
V+GE + +A+ + G HR+ D V V D+ +P AA E VFHG
Sbjct: 493 VDGEVFELSGEAREFLRRRG-HRLTSTDSGAVCQFIVQDLLTPVAAAGDE---NVFHGML 548
Query: 503 RLSSQARRPSAPQG 544
S R+ P G
Sbjct: 549 TAVSDPRKDGRPAG 562
>12_01_0714 + 6223269-6226250
Length = 993
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 29 VTYAGN--HGSTMLSIRQLIFLLILNYSHRALCAPV 130
+ +GN HG+ +I +L+ L LN SH AL P+
Sbjct: 832 IDVSGNAFHGAIPDTIGELVLLRGLNLSHNALTGPI 867
>11_01_0407 + 3090880-3092010
Length = 376
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 230 HHLHSNPPFSIFPTAPP 180
HHL + PP + FP APP
Sbjct: 256 HHLPAAPPRAAFPWAPP 272
>09_03_0025 -
11665969-11666417,11666490-11666594,11666667-11666856,
11666933-11667120,11667240-11667571,11667654-11667940,
11668027-11668911
Length = 811
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 215 NPP---FSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPD 108
NPP +++ + PP +Q SPR+ + G P IRPD
Sbjct: 291 NPPPQEYALMKSDPPVSQRRSPRQHTAQGGGGPT-IRPD 328
>07_01_0245 - 1803170-1803887,1803971-1804641
Length = 462
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 407 ENDGSHVSVHDVTSPPTAAAYEVTPKV 487
E G V+VHD++ P A A VTP V
Sbjct: 251 ERKGWSVTVHDLSGSPVALASMVTPFV 277
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 212 PPFSIFPTAPPANQFYSPRRRSFLNVGPPAHIRPDASS*VSARKSVD 72
PP + PT PP +P + PPAH R + V A K+ D
Sbjct: 191 PPRAPTPT-PPQAPLPAPSKSRASQAPPPAHTRATKKAKVDAAKNKD 236
>03_06_0122 - 31815023-31816357
Length = 444
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 407 ENDGSHVSVHDVTSPPTAAAYEVTPKV 487
E G V+VHD++ P A A VTP V
Sbjct: 234 ERKGWSVTVHDLSGSPVALASMVTPFV 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,575,032
Number of Sequences: 37544
Number of extensions: 386453
Number of successful extensions: 1385
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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