BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0826 (572 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.1 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.0 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 6.6 U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 21 8.7 DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 8.7 DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 8.7 DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 21 8.7 AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 8.7 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.7 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 8.7 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 2.1 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 358 LRVAPEEHPVLLTEAPLNPKANREKM 435 LR+ P H V+ T +NP + EK+ Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 21.8 bits (44), Expect = 5.0 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +2 Query: 215 VWDRRTLM*EMRHKQKRYPDPQIPHLNTE 301 VW+R T + + KQK +P+ + N E Sbjct: 523 VWERDTRVLPINRKQKVFPNGTLIIENVE 551 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.4 bits (43), Expect = 6.6 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = +1 Query: 466 PAMYVAIQAVLSLYGPVVPPVSCWT 540 P+ +A++ L+G ++PP C+T Sbjct: 349 PSAILAMRLSHPLHGNLLPPGVCYT 373 >U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor protein. Length = 129 Score = 21.0 bits (42), Expect = 8.7 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = -3 Query: 519 YDRTVQREHGLDGDVHGG 466 Y + V ++G+ GD +GG Sbjct: 60 YKQRVYDKNGMTGDAYGG 77 >DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -1 Query: 149 SHAKPALHIPEPLSTT 102 SHAKP+L EP T Sbjct: 268 SHAKPSLIDDEPTEVT 283 >DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -1 Query: 149 SHAKPALHIPEPLSTT 102 SHAKP+L EP T Sbjct: 268 SHAKPSLIDDEPTEVT 283 >DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. Length = 152 Score = 21.0 bits (42), Expect = 8.7 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = -3 Query: 264 LFCLCLISYIRV 229 LF LC++SY+ V Sbjct: 8 LFTLCIVSYMMV 19 >AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled receptor protein. Length = 399 Score = 21.0 bits (42), Expect = 8.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -1 Query: 149 SHAKPALHIPEPLSTT 102 SHAKP+L EP T Sbjct: 268 SHAKPSLIDDEPTEVT 283 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -3 Query: 180 DRGEHGARSIISCETGLA 127 D GEH ++ E GLA Sbjct: 130 DPGEHNGDTVTDVEAGLA 147 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 21.0 bits (42), Expect = 8.7 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -3 Query: 180 DRGEHGARSIISCETGLA 127 D GEH ++ E GLA Sbjct: 125 DPGEHNGDTVTDVEAGLA 142 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 188,455 Number of Sequences: 438 Number of extensions: 4985 Number of successful extensions: 10 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 16504155 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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