Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0825
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 128 6e-29
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 116 4e-25
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 116 4e-25
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 105 7e-22
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 97 2e-19
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 82 7e-15
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 77 2e-13
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 76 5e-13
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 72 1e-11
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 68 1e-10
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 66 5e-10
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 65 1e-09
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 64 3e-09
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 54 2e-06
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 51 2e-05
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 50 4e-05
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 46 4e-04
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 46 6e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 43 0.004
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 41 0.016
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 32 0.026
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 36 0.62
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 35 1.4
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 35 1.4
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 34 1.9
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 4.4
UniRef50_Q94249 Cluster: Putative uncharacterized protein; n=2; ... 33 4.4
UniRef50_Q96P70 Cluster: Importin-9; n=27; Eumetazoa|Rep: Import... 33 5.8
UniRef50_UPI00006A22DC Cluster: UPI00006A22DC related cluster; n... 32 7.6
UniRef50_Q5I723 Cluster: VirB6; n=1; Dichelobacter nodosus|Rep: ... 32 7.6
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 7.6
UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3; ... 32 7.6
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 128 bits (310), Expect = 6e-29
Identities = 63/96 (65%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = -1
Query: 539 TPDRTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 363
T R ++R L +DGL+IKKPV VHSR VRKNTEARRKGRHCGFGKR+GTANARMP K L
Sbjct: 35 TNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLL 94
Query: 362 WXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
W R +KKIDRHLYH LYMK KGN
Sbjct: 95 WMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGN 130
Score = 56.4 bits (130), Expect = 4e-07
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXELLQT 85
+G +FKNKRVLMEYIH+KKAEK R+KML+DQ EL+
Sbjct: 128 KGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIAL 187
Query: 84 FAREDEAALTA 52
A+EDE A A
Sbjct: 188 HAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 116 bits (279), Expect = 4e-25
Identities = 54/88 (61%), Positives = 63/88 (71%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
+L +DGL+I+KPV VHSRA RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 35 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 94
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
R +KKIDRH+YHSLY+K KGN
Sbjct: 95 RRLLRRYRESKKIDRHMYHSLYLKVKGN 122
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+G +FKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 120 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 116 bits (279), Expect = 4e-25
Identities = 54/88 (61%), Positives = 63/88 (71%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
+L +DGL+I+KPV VHSRA RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 43 KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRIL 102
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
R +KKIDRH+YHSLY+K KGN
Sbjct: 103 RRLLRRYRESKKIDRHMYHSLYLKVKGN 130
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+G +FKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 105 bits (252), Expect = 7e-22
Identities = 50/88 (56%), Positives = 60/88 (68%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
+L++D L+I+KPV VHSR+ RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 43 KLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVL 102
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
R A KID+HLYH LY + KGN
Sbjct: 103 RRLLKRYREAHKIDKHLYHLLYQQCKGN 130
Score = 46.4 bits (105), Expect = 4e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = -3
Query: 282 LTLHEGEG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
L + +G FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 122 LLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 97.5 bits (232), Expect = 2e-19
Identities = 51/96 (53%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -1
Query: 530 RTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXX 354
R SVR L +DG +I+KPV VHSRA RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 58 RKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMR 117
Query: 353 XXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNCSR 246
R KKIDRH+Y LYM+AKGN R
Sbjct: 118 RLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFR 153
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+G +F+NKR L+E+IH+ K EK + + L++Q
Sbjct: 148 KGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 82.2 bits (194), Expect = 7e-15
Identities = 37/74 (50%), Positives = 46/74 (62%)
Frame = -1
Query: 476 VHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKID 297
+HSRA + A+R GRH G+GKRRGT AR+P K LW R AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 296 RHLYHSLYMKAKGN 255
+H+YHS+Y+K KGN
Sbjct: 137 KHMYHSMYLKCKGN 150
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+G +FKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 148 KGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 77.4 bits (182), Expect = 2e-13
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -1
Query: 530 RTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXX 354
R ++R L + ++ K + SR +R A+R GRH G GKRRGT ARMP K LW
Sbjct: 38 REAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQ 97
Query: 353 XXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
R +KIDRHLY +LY KAKGN
Sbjct: 98 RQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGN 130
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 76.2 bits (179), Expect = 5e-13
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = -1
Query: 539 TPDRTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 363
T R S+R L +DG ++KK HSR +R E + GRH G GKR+G+ N+R K +
Sbjct: 35 TDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLI 94
Query: 362 WXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
W R + K++RHLY SLY+K+KGN
Sbjct: 95 WIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGN 130
Score = 33.1 bits (72), Expect = 4.4
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 270 EGEG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+ +G +FKNK++L E+IH+ K E+ R + D+
Sbjct: 126 KSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 74.1 bits (174), Expect = 2e-12
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
+L +DGL+I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 43 KLIEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSIL 99
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
+KKID H+ HSLY++ K N
Sbjct: 100 HRLLRRYCESKKIDCHMCHSLYLRVKRN 127
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -3
Query: 255 LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+FKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 128 VFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/87 (42%), Positives = 48/87 (55%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
RL ++G++ KKPV SR R E ++KGRH G G R+G ARM +KELW
Sbjct: 43 RLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRAL 102
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKG 258
+ KKIDR Y LY++AKG
Sbjct: 103 RKELRKLKEQKKIDRRTYRMLYIRAKG 129
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 68.1 bits (159), Expect = 1e-10
Identities = 35/83 (42%), Positives = 46/83 (55%)
Frame = -1
Query: 503 GLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 324
GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 323 XXRTAKKIDRHLYHSLYMKAKGN 255
R +KKIDR +YHSL +K KGN
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGN 585
Score = 35.9 bits (79), Expect = 0.62
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = -3
Query: 264 EG*LFKNKRVLMEYIHRKKAEKARTKMLSDQ 172
+G +FKNK L+++IH+ KA++A K+L+DQ
Sbjct: 583 KGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/88 (39%), Positives = 48/88 (54%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
+L +D ++I K SR RK EA++KGRH G GKR GTANARMPQK++W
Sbjct: 43 QLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAM 102
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGN 255
R +I + + Y +AKG+
Sbjct: 103 RAMLKEMRANGEITKEDFRVFYKQAKGH 130
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 64.9 bits (151), Expect = 1e-09
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Frame = +1
Query: 196 GLLSLLPVDVLHEHTLVLEQLPFAF-M*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSF 372
GL+ L VDVLHE+ L LE +PF + Y +++ L RS + L L +F
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH-RILILLIQVTF 123
Query: 373 CGIRALAVPLLLPKPQ*RPFLRASVFLRTQARECTATGFLM-TRPS*NNLTDVLSGVGV 546
GI+ALAVP L P PF R+ VF R +ARE T + L + + L D+L+GVG+
Sbjct: 124 SGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWTDSHRLPDDQAIFDQLPDLLTGVGI 182
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 63.7 bits (148), Expect = 3e-09
Identities = 37/91 (40%), Positives = 46/91 (50%)
Frame = -1
Query: 515 LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXX 336
L ++G++ KK S A V+K E R+KGR G G RRG A AR P KE W
Sbjct: 46 LIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALR 105
Query: 335 XXXXXXRTAKKIDRHLYHSLYMKAKGNCSRT 243
R + KIDR +Y LY AKG R+
Sbjct: 106 KTLKQLRDSGKIDRKVYRKLYRMAKGGAFRS 136
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 54.0 bits (124), Expect = 2e-06
Identities = 31/92 (33%), Positives = 41/92 (44%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXX 339
RL +G++ +P SR+ RK + KGR G G R+G+ANAR P+K W
Sbjct: 48 RLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQ 107
Query: 338 XXXXXXXRTAKKIDRHLYHSLYMKAKGNCSRT 243
R I Y Y KAKG R+
Sbjct: 108 RKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/87 (33%), Positives = 38/87 (43%)
Frame = -1
Query: 515 LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXX 336
L + G++ K P+ SR R+ E ++KGR G G R+G AR K W
Sbjct: 43 LIKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQR 102
Query: 335 XXXXXXRTAKKIDRHLYHSLYMKAKGN 255
+ K ID Y LY K KGN
Sbjct: 103 KLLKELKEKKIIDNKTYWDLYKKVKGN 129
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/64 (42%), Positives = 31/64 (48%)
Frame = -1
Query: 437 RRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKG 258
RRKGR G G+R+G A AR+ KE W R + IDR Y LYM AKG
Sbjct: 71 RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKG 130
Query: 257 NCSR 246
R
Sbjct: 131 GTFR 134
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 46.4 bits (105), Expect = 4e-04
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = -1
Query: 269 KAKGNCSRTSVCSWSTSTGXXXXXXXXXXXXXXXRPAAIK*RRHASAARNVLPPRRRNCC 90
K + CS+T SW+TST RPA ++ R+HASAA++ PR+R
Sbjct: 3 KRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRKSS 62
Query: 89 RPSLEKTKPR 60
R S + +PR
Sbjct: 63 RLSPRRKRPR 72
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 46.0 bits (104), Expect = 6e-04
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -1
Query: 530 RTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWX 357
R VR L ++GL+ KP +SR R E R+ GR G G RRGT AR KE+W
Sbjct: 34 RNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWV 93
Query: 356 XXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKG 258
+ ID+ + +LY AKG
Sbjct: 94 PRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKG 126
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = -1
Query: 530 RTSVR-LFQDG-LVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 357
R +R L +DG +++ K V + + + K G R+G AR K++W
Sbjct: 38 RDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWV 97
Query: 356 XXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKG 258
R K IDRH Y LY+K KG
Sbjct: 98 KRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKG 130
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 41.1 bits (92), Expect = 0.016
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = -1
Query: 530 RTSVRLFQDGLVI-KKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXX 354
R VR D +I KK +S ++K E KGR G G RGT AR P+K W
Sbjct: 37 REDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWIS 96
Query: 353 XXXXXXXXXXXXRTAKKIDRHLYHSLY 273
+T KID+ Y Y
Sbjct: 97 RIRALRRELRELKTNNKIDKKTYRRYY 123
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 32.3 bits (70), Expect(2) = 0.026
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 302 IDRHLYHSLYMKAKGNCSRT 243
ID HLY SLY+K KGN +T
Sbjct: 108 IDYHLYRSLYLKVKGNVLKT 127
Score = 27.5 bits (58), Expect(2) = 0.026
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 518 RLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGT 393
+L +DGL+I+K T ARR+G H G KR+GT
Sbjct: 77 KLSEDGLIIQKSA-----------TLARRRGWHMGIRKRKGT 107
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 35.9 bits (79), Expect = 0.62
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 521 VRLFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 360
+ LF+ ++IKK + S + ++ G G G+R+GT NAR K LW
Sbjct: 41 IDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILW 94
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 34.7 bits (76), Expect = 1.4
Identities = 21/90 (23%), Positives = 44/90 (48%)
Frame = +1
Query: 52 SGKRGFVFSSEGLQQFLLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLH 231
+G +FS++G FL++ TFL ++ + F GL + R G L ++ +
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIIS--IFFYLRGLLRTSGFHRQGYLIMIIASLFP 190
Query: 232 EHTLVLEQLPFAFM*SEWYRCLSIFLAVLY 321
T+ L + +F+ +++ +S+ +LY
Sbjct: 191 WVTVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 34.7 bits (76), Expect = 1.4
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = -1
Query: 515 LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXX 336
L GL+ +P SR R ++KGR G G R+G R ++E W
Sbjct: 41 LIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKVRAMR 97
Query: 335 XXXXXXRTAKKIDRHLYHSLYMKAKGNCSR 246
+ K++ ++ LY KGN R
Sbjct: 98 RFLNTLKRKGKLEPRVWRQLYRMVKGNYFR 127
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 34.3 bits (75), Expect = 1.9
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 106 LGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEQL 258
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LE +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHV 101
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +1
Query: 100 LLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEQL 258
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E++
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_Q94249 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 204
Score = 33.1 bits (72), Expect = 4.4
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +2
Query: 197 AFSAFFLWMYSMSTRLFLNNYPSPSCRVSGIDACQSSWQFCTSGAIFLKPFVFVPIVPSV 376
A S F L +Y R+ + I S + + T + LKP++ IV ++
Sbjct: 58 AISHFVLMLYDCDLRMIDMAFAIWPIVTVTIALVFSYFSYSTHSSTSLKPYIAHHIVMAI 117
Query: 377 AYAHWLYLFSYQSHSDDPFYVLLCFC 454
+Y L+LF+ + F +L FC
Sbjct: 118 SYCFCLFLFAMFAWKQHFFVEILSFC 143
>UniRef50_Q96P70 Cluster: Importin-9; n=27; Eumetazoa|Rep:
Importin-9 - Homo sapiens (Human)
Length = 1041
Score = 32.7 bits (71), Expect = 5.8
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 152 LLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLNNYPSPSCRVSGIDACQSSWQFCTSGA 331
LL RA W+ S F +A S + + +T L+ PS R+S + A W +C
Sbjct: 494 LLGRA-LWAASRFTVAMSPELIQQFLQATVSGLHETQPPSVRISAVRA---IWGYCDQLK 549
Query: 332 IFLKPFVFVPIVPSV 376
+ V P +PS+
Sbjct: 550 VSESTHVLQPFLPSI 564
>UniRef50_UPI00006A22DC Cluster: UPI00006A22DC related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A22DC UniRef100 entry -
Xenopus tropicalis
Length = 676
Score = 32.3 bits (70), Expect = 7.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 292 CLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRALAVPLLLPKP 417
CL + A+ Y+ S LK+ CL TH G R L+V L + +P
Sbjct: 603 CLDQYTAISYYPSQLLKSECL-THKPDDGYRRLSVRLSVAQP 643
>UniRef50_Q5I723 Cluster: VirB6; n=1; Dichelobacter nodosus|Rep:
VirB6 - Dichelobacter nodosus (Bacteroides nodosus)
Length = 364
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 321 VQNCQED*QASIPLTLHEGEG*LFKNKRVLMEYIHRKKAEKA 196
+QN ++D Q ++ L GE FK + M Y+H K A A
Sbjct: 126 LQNAKKDKQNNVDLVKQHGENSFFKPIAIAMAYVHDKAANSA 167
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 64 GFVFSSEGLQQFLLLGGNTFLAALACLLHFIAAGLSLVAKHLRPGLLS 207
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 745
Score = 32.3 bits (70), Expect = 7.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 220 DVLHEHTLVLEQLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSF-CGIRALAV 396
DV H +L E++ M W+ C ++F+ + + N +C C HS GIR L
Sbjct: 14 DVCHRISLFSERV--GAMRDAWFSCRTLFIFLFFKYINIYIYICFCMHSRVGAGIRDLQF 71
Query: 397 PL 402
L
Sbjct: 72 SL 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,526,163
Number of Sequences: 1657284
Number of extensions: 9302432
Number of successful extensions: 26839
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26810
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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