Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0825
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    30   0.015
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 0.015
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 474 YCYRFLDDKTILKQSYGCSVW 536
           Y Y++LD K ++ QS+G S W
Sbjct: 464 YIYKYLDKKNVVVQSWGASQW 484



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 141 PPSLYCGGPQPGR 179
           P SLYCG P  G+
Sbjct: 356 PWSLYCGEPPCGQ 368


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 109 GGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDV 225
           G +T L   +CLLH +     L+ +    G L  + + V
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFILLQV 306


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 309 QED*QASIPLTLHEGEG*LFKNKRVLMEYIHRKKAEKAR 193
           Q+  Q  I LTL E  G +  N    M+Y+ +   E  R
Sbjct: 302 QKKLQKEIDLTLQENHGKISYNVLQSMKYLDQVVCESLR 340


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 79  SEGLQQFLLLGGNTFLAALACL 144
           SE ++QFL     TF+A LA L
Sbjct: 461 SEMVKQFLFTQKFTFVAGLATL 482


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +3

Query: 381 TRIGCTSSLTKATVTTLSTC 440
           TRI  T S    T  TL TC
Sbjct: 42  TRISSTVSRNTDTYPTLETC 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,688
Number of Sequences: 336
Number of extensions: 2432
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)