BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0825 (548 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 2e-26 SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) 29 2.5 SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3) 28 4.4 SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 28 5.8 SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 27 7.6 >SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 224 Score = 115 bits (277), Expect = 2e-26 Identities = 58/93 (62%), Positives = 65/93 (69%), Gaps = 1/93 (1%) Frame = -1 Query: 530 RTSVR-LFQDGLVIKKPVAVHSRACVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXX 354 R +VR L +DGL+IKKP VHSRA VRK EAR KGRH G GKR+GTANARMPQK +W Sbjct: 66 RQNVRKLIKDGLIIKKPEIVHSRARVRKADEARSKGRHSGHGKRKGTANARMPQKTIWIR 125 Query: 353 XXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGN 255 R AKKID H+YHSLYMK+KGN Sbjct: 126 RMRVLRRLLRKYREAKKIDNHMYHSLYMKSKGN 158 Score = 60.9 bits (141), Expect = 7e-10 Identities = 31/70 (44%), Positives = 42/70 (60%) Frame = -3 Query: 270 EGEG*LFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXELL 91 + +G +FKNKRVLMEYIH+KKAEKAR+K+LSDQ ++L Sbjct: 154 KSKGNVFKNKRVLMEYIHKKKAEKARSKLLSDQAEARRNKNKAAKQRRDDRMEQKRKDML 213 Query: 90 QTFAREDEAA 61 +A+E+EAA Sbjct: 214 SAYAKEEEAA 223 >SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 172 Score = 29.1 bits (62), Expect = 2.5 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 338 LKPFVFVPIVPSVAY--AHWLYLFSYQSHSDDPFYVLLCFCGH 460 +K + F+P V + W + ++ H+DDPF V C H Sbjct: 72 IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114 >SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) Length = 646 Score = 29.1 bits (62), Expect = 2.5 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +2 Query: 338 LKPFVFVPIVPSVAY--AHWLYLFSYQSHSDDPFYVLLCFCGH 460 +K + F+P V + W + ++ H+DDPF V C H Sbjct: 72 IKDYSFLPCCFKVCHRTCFWRWAHNHSIHADDPFEVACPHCRH 114 >SB_51145| Best HMM Match : RCSD (HMM E-Value=1.3) Length = 248 Score = 28.3 bits (60), Expect = 4.4 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +1 Query: 97 FLLLGGNTFLAALAC 141 F L+GG TFLAALAC Sbjct: 70 FALMGGLTFLAALAC 84 >SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1275 Score = 27.9 bits (59), Expect = 5.8 Identities = 13/58 (22%), Positives = 25/58 (43%) Frame = +2 Query: 173 WSLSIFVLAFSAFFLWMYSMSTRLFLNNYPSPSCRVSGIDACQSSWQFCTSGAIFLKP 346 W ++ + S W+Y +S R + + + + G SSWQ + + L+P Sbjct: 683 WGFNLLAMFSSCINPWLYCLSNRTYRREFMALLLCMPGFQTGGSSWQPTATLQMPLRP 740 >SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) Length = 787 Score = 27.9 bits (59), Expect = 5.8 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 113 PPRRRNCCRPSLEKTKPRLPL 51 PP +N +P ++KTKP PL Sbjct: 199 PPSEKNAFQPPMKKTKPSSPL 219 >SB_26423| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 175 Score = 27.9 bits (59), Expect = 5.8 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 467 RACVRKNTEARRKGRHCGFGKRRGTANAR 381 +A RK RR+ R G K+R TANAR Sbjct: 17 KANSRKKRRRRRRPRLTGLSKQRQTANAR 45 >SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) Length = 998 Score = 27.5 bits (58), Expect = 7.6 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Frame = -1 Query: 305 KIDRHL---YHSLYMKAKGNCSRTSVCSWS-TST 216 K DRH+ H+ ++ +G CS VC W TST Sbjct: 567 KKDRHVAEDMHARFILLRGECSGGKVCEWQLTST 600 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,850,519 Number of Sequences: 59808 Number of extensions: 302312 Number of successful extensions: 931 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 860 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 928 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1264269032 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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