BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0825
(548 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative odorant-b... 26 0.71
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 25 1.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 1.6
DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein. 24 3.8
AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein. 24 3.8
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 5.0
AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease pr... 23 6.6
>AJ697720-1|CAG26913.1| 207|Anopheles gambiae putative
odorant-binding protein OBPjj10 protein.
Length = 207
Score = 26.2 bits (55), Expect = 0.71
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 146 RRHASAARNVLPPRRRNCCRPSLEKTKPR 60
R HASA + PR R+ C + T+ R
Sbjct: 67 RMHASARKRAYCPRTRSACAETFPSTRRR 95
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 463 LVSAKTQKHVERVVTVALVREEVQPMRVCHRRN 365
++ K Q++ ER +A REE++ MR H R+
Sbjct: 31 ILMTKQQEYTERRELIA--REEMEKMRAAHERD 61
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.0 bits (52), Expect = 1.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 474 YCYRFLDDKTILKQSY 521
YC+RF D K I ++SY
Sbjct: 1253 YCHRFFDRKRIHRKSY 1268
>DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein.
Length = 93
Score = 23.8 bits (49), Expect = 3.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 393 CTSSLTKATVTTLSTCFCVFADTSAGVYC 479
C +++ TVT STC AD + + C
Sbjct: 27 CAIAVSGTTVTLQSTCKLFTADVVSSITC 55
>AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein.
Length = 80
Score = 23.8 bits (49), Expect = 3.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 393 CTSSLTKATVTTLSTCFCVFADTSAGVYC 479
C +++ TVT STC AD + + C
Sbjct: 14 CAIAVSGTTVTLQSTCKLFTADVVSSITC 42
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 483 CSSTLPRLCPQK 448
CSS L RLCP K
Sbjct: 732 CSSNLLRLCPDK 743
>AJ276486-1|CAB90818.1| 364|Anopheles gambiae serine protease
protein.
Length = 364
Score = 23.0 bits (47), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 105 SWRQYVPRGACVPPSLYCGGP 167
SW VP GA V SL G P
Sbjct: 10 SWCSLVPLGATVGQSLNSGDP 30
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,940
Number of Sequences: 2352
Number of extensions: 9779
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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