Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0824
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09) 35 0.043
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 34 0.099
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 32 0.30
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 32 0.30
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 32 0.30
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 32 0.30
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 0.40
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 32 0.40
SB_52869| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 32 0.40
SB_58327| Best HMM Match : Filamin (HMM E-Value=1.9e-05) 31 0.53
SB_29541| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 31 0.70
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_51111| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_59387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_13763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 29 2.1
SB_7118| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_57460| Best HMM Match : Folate_rec (HMM E-Value=0.03) 29 3.7
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 28 6.5
SB_7015| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 27 8.6
SB_27213| Best HMM Match : DUF1416 (HMM E-Value=0.18) 27 8.6
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRV---KDVAHGTVGKPVTFL 179
++ A F PR VGEHR+ V++ + P+P +PF KV D S + V + + +G+PV F
Sbjct: 375 SYVARFTPREVGEHRITVMVGATPLPGTPFVTKVGDPSKVIVTPAESMRSPVLGEPVKFE 434
Query: 180 VETMAAGPGNLEVTVNG--GRVP-----TAAARKELTHTPS 281
V+T +AG G L + G G +P TA + ++++ P+
Sbjct: 435 VDTTSAGLGELAIKCKGPTGGIPVDVRATARGKYQVSYLPN 475
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
+Y FTPR+ H + + +PG+PFV V P++VI E +G+ F
Sbjct: 375 SYVARFTPREVGEHRITVMVGATPLPGTPFVTKVGDPSKVI-VTPAESMRSPVLGEPVKF 433
Query: 449 SVDSPTS 469
VD+ ++
Sbjct: 434 EVDTTSA 440
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSG 406
Y +S+ P P + FNG+ VP SP P +++ G G
Sbjct: 468 YQVSYLPNTPGDYVTHCTFNGEDVPESPLRSVAGDPDKIVAHGDG 512
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVG 161
+ +F+P G ++++V D P+ SPF +KV + ++V T G
Sbjct: 839 YHVKFIPNRPGTYKVHVRCDGEPVENSPFLIKVGEPEPVQVDLTLETTSG 888
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 206 EFRG-DGEWRTGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPA 382
E RG D E + G +G Y + F P P + V +R +G+ V SPF+ V P
Sbjct: 818 EVRGPDEEIFPSSIGKGEEGC--YHVKFIPNRPGTYKVHVRCDGEPVENSPFLIKVGEPE 875
Query: 383 RV 388
V
Sbjct: 876 PV 877
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP-ARVIGAGSGEPPE-KVSVGDAYTFS 451
+ F P + V++R G V GSPF +V P + ++ +P E + V +
Sbjct: 746 LRFVPYSKGTYKVDVRCKGKSVEGSPFSMNVGDPSSTLVRLREADPIESQYMVSRELDIA 805
Query: 452 VDSPTSPHVEVLGPARRP 505
+D P H EV R P
Sbjct: 806 MDIP-DDHWEVTSEVRGP 822
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP-----ARVIGAGSGEPPEKV 424
G ++Y I F P++ H + +++ G H+ GSPF +V AP A+ AG G V
Sbjct: 2842 GTNSYTIRFMPKESGEHVINVKYRGRHISGSPFKVYVEAPVWGGAAKCTAAGPGLERGVV 2901
Query: 425 S-VGDAYTFSVDS-PTSPHVEVLGPARRPVLC 514
GD ++ D+ P + V GPA+ + C
Sbjct: 2902 GHPGDFTVWTRDAGPGGLAIAVEGPAKAEITC 2933
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 27 VPRAVGEHRLNVLIDSVPIPASPFHLKVYD--VSAIRV--KDVAHGTVGKPVTFLVETMA 194
VP+ G H L V D PIP SPF + A++ K + G +P F V T
Sbjct: 1928 VPKTPGPHELTVKYDDQPIPGSPFKFNAVEGGPGAVKAFGKGLERGLAKEPCEFTVVTRD 1987
Query: 195 AGPGNLEVTVNG 230
AGPG L + V G
Sbjct: 1988 AGPGGLSLAVEG 1999
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGT------VGKPVT 173
+ FVP+ G+H +NV D IP SPF ++V A K A+G GK
Sbjct: 3037 YAIRFVPKEFGDHLVNVKFDETHIPGSPFKIRVGGGGAHPEKVKAYGPGLSSGHAGKSAE 3096
Query: 174 FLVETMAAGPGNLEVTVNG 230
F V + AG G L ++V+G
Sbjct: 3097 FTVNALEAGSGALALSVDG 3115
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARV--IGAGSGEPPEKVSVGDAY 442
TY+ +TP D H+V+++F GD+VPGSPF+ I P ++ V
Sbjct: 1822 TYSCYYTPEDEGRHSVDVKFAGDNVPGSPFLVKAEKGLDFDKIKCAPRNPVDEPPVNKEL 1881
Query: 443 TFSVDSPTSPHVEVLGPARRPVLCKYLLKKP*VKMR-RANGTPSHLCL 583
++VD+ + V G +L K+P VK+R +GT C+
Sbjct: 1882 VYAVDAAAAEPVPGQGLVNGSLLTPSGKKEP-VKVRNNKDGTYDVACV 1928
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSA---PARVIGAGSGEPPEKVSVGDAY 442
YA ++TP PH V + + HVPGSPF + ++V AG G P V+ G
Sbjct: 1244 YACTYTPEKDVPHRVNVTYGSKHVPGSPFKVPIKPAGDSSKVKVAGPGVAPTGVNPGKPT 1303
Query: 443 TFSVD 457
F++D
Sbjct: 1304 WFTID 1308
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 266 HTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSA---PARVIGAGSGEPPEKVSVGD 436
HTY+ + P P + V +++NG H+P SPF VS+ + G G P V G
Sbjct: 667 HTYSCRYVPNTPGKYDVHVKWNGRHIPKSPFRVEVSSDLDAGKAYAKGPGLAPTGVVAGK 726
Query: 437 AYTFSV 454
F+V
Sbjct: 727 YTDFTV 732
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFH---LKVYDVSAIRV--KDVAHGTVGKPVT 173
+F + P G H L V IP SPF L V D S + + H + KP
Sbjct: 1438 SFGVSYTPFEEGIHDLAVKFGDDHIPGSPFKVDVLPVTDPSKCKAYGPGLQHAQLNKPAD 1497
Query: 174 FLVETMAAGPGNLEVTVNG 230
F VET AG G L + + G
Sbjct: 1498 FTVETKGAGAGGLSLAIEG 1516
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPA--RVIGAG----SGEPPEKVS- 427
T ++ + P +P +T+ ++F +HVPGSPF ++ P ++ EP ++VS
Sbjct: 2733 TCSVDYLPTEPGKYTINIKFADEHVPGSPFKANIRRPGEEEIVAMSEDGVESEPTQRVSQ 2792
Query: 428 -VGDAYTFSVDSPTSPH 475
D +F +P PH
Sbjct: 2793 VFEDLVSFGAAAP-QPH 2808
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKV 424
G YAI F P++ H V ++F+ H+PGSPF V G G PEKV
Sbjct: 3033 GKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPFKIRV--------GGGGAHPEKV 3079
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Frame = +2
Query: 266 HTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAG---SGEPPEKVSVGD 436
+T ++SF P++ H V ++ +G HV GSPF VS P + +G+ K G+
Sbjct: 2637 NTLSVSFVPQETGEHFVSVKKSGKHVTGSPFSVMVSGPGPADASKVKVTGDGLRKGVTGE 2696
Query: 437 AYTFSVDSPTSPH----VEVLGPARRPVLC 514
F+V++ + + + + GP++ + C
Sbjct: 2697 PARFTVNTRDAGYGGLGLSIEGPSKAEINC 2726
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKV-----YDVSAIRV--KDVAHGTVGKPVTFLV 182
FVP+ GEH ++V + SPF + V D S ++V + G G+P F V
Sbjct: 2643 FVPQETGEHFVSVKKSGKHVTGSPFSVMVSGPGPADASKVKVTGDGLRKGVTGEPARFTV 2702
Query: 183 ETMAAGPGNLEVTVNG 230
T AG G L +++ G
Sbjct: 2703 NTRDAGYGGLGLSIEG 2718
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Frame = +2
Query: 218 DGEWRTGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF---VCHVSAPARV 388
+G DC G + + + P +P + V + + H+PGSPF + H P++V
Sbjct: 1131 EGPSEAKIDCIDN-GDGSCDVHYWPNEPGDYMVNILYADKHIPGSPFKARISHPFDPSKV 1189
Query: 389 IGAGSGEPPEKVSVGDAYTFSVDSPTSP----HVEVLGPARRPVLC 514
G G P + VGD +D+ + V+V+ +PV C
Sbjct: 1190 KVEGPGIEP-GICVGDPADIDIDTRLAGDNLLEVKVVDDLNQPVKC 1234
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAI---RVKDVA------HGTVG 161
++ F+P+ GEH +NV I SPF KVY + + K A G VG
Sbjct: 2845 SYTIRFMPKESGEHVINVKYRGRHISGSPF--KVYVEAPVWGGAAKCTAAGPGLERGVVG 2902
Query: 162 KPVTFLVETMAAGPGNLEVTVNG 230
P F V T AGPG L + V G
Sbjct: 2903 HPGDFTVWTRDAGPGGLAIAVEG 2925
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPF---VCHVSAPARVIGAGSG 406
++ +S+TP + H + ++F DH+PGSPF V V+ P++ G G
Sbjct: 1438 SFGVSYTPFEEGIHDLAVKFGDDHIPGSPFKVDVLPVTDPSKCKAYGPG 1486
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 281 SFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAG 400
SF PR+ H + +R NG + GSPF +V+AP V G
Sbjct: 2288 SFIPRETGMHLIHIRKNGRDITGSPFPLNVTAPEAVSQVG 2327
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV----YDVSAIRVKDVAHGT------VG 161
F E+ P G+H + V PI SPFH+ V D +VK G G
Sbjct: 767 FLVEYQPVNTGKHTIKVGYGGQPIHGSPFHVMVSPPKVDPIPSKVKVFGAGVEPTGLKAG 826
Query: 162 KPVTFLVETMAAGPGNLEVTVNG 230
F V+T AG G L+V V G
Sbjct: 827 MRAPFTVDTRGAGDGELDVFVEG 849
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVK----DVAHGTVGKPVTFL 179
+ + P G H + V + PIP SPF + + + + + + G V + F
Sbjct: 1056 YTVTYYPDKPGMHTVAVHFNDKPIPKSPFKVNICSTNTSKCRAYGPGLEKGFVDQRNDFK 1115
Query: 180 VETMAAGPGNLEVTVNG 230
+ET AG G L +T+ G
Sbjct: 1116 IETKGAGEGGLGLTIEG 1132
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVY---DVSAIRV--KDVAHGTV--GKPV 170
+ + P HR+NV S +P SPF + + D S ++V VA V GKP
Sbjct: 1244 YACTYTPEKDVPHRVNVTYGSKHVPGSPFKVPIKPAGDSSKVKVAGPGVAPTGVNPGKPT 1303
Query: 171 TFLVETMAAGPGNLEVTV 224
F ++ AG G++ VTV
Sbjct: 1304 WFTIDCKDAGKGDVHVTV 1321
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTFSVD 457
+++ P +P + + ++F H+PGSPF+ + + A P +VG +D
Sbjct: 2017 VTYVPDEPGEYNINVKFADKHIPGSPFLAQIYNTWDDLDAAKPRP----TVGKPCDVGLD 2072
Query: 458 SP-TSPHVEVL-GPARRP 505
P P V VL G +RP
Sbjct: 2073 IPDLPPDVSVLKGTLKRP 2090
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 266 HTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAG 400
+T +SF P +P H + ++ G VPGSP+ V A V G
Sbjct: 2464 NTLGVSFVPVEPGEHKIRIKKEGKDVPGSPYSVMVEAAEAVNAVG 2508
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV---YDVSAIRVKDVAHGTVG---K 164
P + P G +++NV S +P SPF+++ +D S ++V +
Sbjct: 1628 PGIHAVTYTPEDEGRYKVNVKYASTHVPNSPFNVRAGPPFDASKVKVSGPGVDETPYTCE 1687
Query: 165 PVTFLVETMAAGPGNLEVTVN 227
PV FL + AG L VTV+
Sbjct: 1688 PVEFLCDCSEAGTAPLGVTVS 1708
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV--SAPARVIGAGSGEPPEKVSVGDAY 442
TY ++ P+ P PH + ++++ +PGSPF + P V G G E+ +
Sbjct: 1922 TYDVACVPKTPGPHELTVKYDDQPIPGSPFKFNAVEGGPGAVKAFGKG--LERGLAKEPC 1979
Query: 443 TFSV----DSPTSPHVEVLGPARRPVLCK 517
F+V P + V GP++ + C+
Sbjct: 1980 EFTVVTRDAGPGGLSLAVEGPSKAEIKCQ 2008
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 30 PRAVGEHRLNVLIDSVPIPASPFHLKV---YDVSAIRVK--DVAHG-TVGKPVTFLVETM 191
P G++ +N+L IP SPF ++ +D S ++V+ + G VG P ++T
Sbjct: 1154 PNEPGDYMVNILYADKHIPGSPFKARISHPFDPSKVKVEGPGIEPGICVGDPADIDIDTR 1213
Query: 192 AAGPGNLEVTV 224
AG LEV V
Sbjct: 1214 LAGDNLLEVKV 1224
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP-----ARVIGAGSGEPPEKVSVGD 436
+A+++TP D + V +++ HVP SPF P +V G G E P +
Sbjct: 1631 HAVTYTPEDEGRYKVNVKYASTHVPNSPFNVRAGPPFDASKVKVSGPGVDETPYTCEPVE 1690
Query: 437 AYTFSVDSPTSPHVEVLGPARRPVL 511
++ T+P + P P L
Sbjct: 1691 FLCDCSEAGTAPLGVTVSPPSGPDL 1715
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKV 110
F+PR GEH L V D PIP SPF + V
Sbjct: 2200 FLPREPGEHFLTVKKDKQPIPGSPFSILV 2228
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
TY +++ P P HTV + FN +P SPF ++ + G EK V F
Sbjct: 1055 TYTVTYYPDKPGMHTVAVHFNDKPIPKSPFKVNICSTNTSKCRAYGPGLEKGFVDQRNDF 1114
Query: 449 SVDS 460
+++
Sbjct: 1115 KIET 1118
Score = 34.7 bits (76), Expect = 0.057
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
G T ++S+ P + + + ++F +H+PGSPF P
Sbjct: 1528 GDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPFTAKAGRP 1567
Score = 34.7 bits (76), Expect = 0.057
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF--VCHVSAPARVIGAGSGEPPEKVSVG 433
G TY +++ P P + +++++ VP SPF S A + P EKV
Sbjct: 1723 GDGTYTVAYVPDKPGRYNIDVKYGDRRVPRSPFRPTVKPSGDASKVKVKGLGPNEKVMTN 1782
Query: 434 DAYTFSVDSPT----SPHVEVLGPARRPV 508
F VD+ +P +GP ++ V
Sbjct: 1783 QENDFLVDARNAGKGTPVCTCIGPNKKDV 1811
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVS------APARVIGAGSGEPPE 418
Q + + + P + HT+++ + G + GSPF VS P++V G+G P
Sbjct: 762 QDNQEFLVEYQPVNTGKHTIKVGYGGQPIHGSPFHVMVSPPKVDPIPSKVKVFGAGVEPT 821
Query: 419 KVSVGDAYTFSVDS 460
+ G F+VD+
Sbjct: 822 GLKAGMRAPFTVDT 835
Score = 33.9 bits (74), Expect = 0.099
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSA 376
I+F P +P H + ++ NG HV SPF V A
Sbjct: 2110 ITFVPYEPGEHLISIKKNGRHVQNSPFSVMVQA 2142
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVS 373
IS+ P P +T+ +RF + +PGSPF V+
Sbjct: 2943 ISYLPTAPGEYTIHIRFADEDIPGSPFKVFVT 2974
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYD-VSAIRVK----DVAHGTVGKPVTFLVET 188
+ P G++ ++V SP+ +KV V A R+K + G KP F VET
Sbjct: 870 YFPSKFGKYVVSVTWSGEQAAKSPYEVKVATAVDASRIKAYGPGLERGIANKPCHFTVET 929
Query: 189 MAAGPGNLEVTVNG 230
AG +L + G
Sbjct: 930 KGAGVDSLGFAIEG 943
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAAGP 203
+VP GE+ +NV IP SPF ++Y+ TVGKP ++ P
Sbjct: 2019 YVPDEPGEYNINVKFADKHIPGSPFLAQIYNTWDDLDAAKPRPTVGKPCDVGLDIPDLPP 2078
Query: 204 GNLEVTVNGGRVPTAAARKE 263
+V+V G + ++ KE
Sbjct: 2079 ---DVSVLKGTLKRPSSNKE 2095
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP-ARVIGAGSG 406
T + F P + H + ++ G H+ GSPF V AP A IG G
Sbjct: 2551 TLSAVFIPNETGEHIINVKKFGRHIDGSPFSVMVVAPEANAIGRPCG 2597
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 266 HTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSA--PARVIG 394
++ + SF PR+P H + ++ + +PGSPF V A P +G
Sbjct: 2194 NSISCSFLPREPGEHFLTVKKDKQPIPGSPFSILVEAEEPIEAVG 2238
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSP 355
G +T ++FTPR+ H V +R +G +P SP
Sbjct: 2369 GDNTLGVAFTPREVGEHLVHVRKDGCELPESP 2400
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKV 110
F PR VGEH ++V D +P SP + V
Sbjct: 2377 FTPREVGEHLVHVRKDGCELPESPISIMV 2405
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDV------AHG-TVGKPVTFLV 182
++P A GE+ +++ IP SPF + V R +D+ + G VG+P +F V
Sbjct: 2945 YLPTAPGEYTIHIRFADEDIPGSPFKVFVTTEVEDRFRDLKLSDLESSGLKVGQPASFSV 3004
Query: 183 ETMAAGPGNLEVTV 224
+T A G + TV
Sbjct: 3005 QTNAP-VGKVSATV 3017
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV-YDVSAIRVKDVAHG------TVGKPV 170
+ +VP G++ ++V + IP SPF ++V D+ A + G GK
Sbjct: 669 YSCRYVPNTPGKYDVHVKWNGRHIPKSPFRVEVSSDLDAGKAYAKGPGLAPTGVVAGKYT 728
Query: 171 TFLVETMAAGPGNLEVTV 224
F V T AG G + V V
Sbjct: 729 DFTVFTAGAGEGKVSVKV 746
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKV---YDVSAIRV---KDVAHGTVGKPVTFLVE 185
+ P G H ++V +P SPF +K D I+ V V K + + V+
Sbjct: 1827 YTPEDEGRHSVDVKFAGDNVPGSPFLVKAEKGLDFDKIKCAPRNPVDEPPVNKELVYAVD 1886
Query: 186 TMAAGPGNLEVTVNGGRVPTAAARKELTHTPSASRRGIRGLTPLSCV 326
AA P + VNG + T + +KE P R G ++CV
Sbjct: 1887 AAAAEPVPGQGLVNGSLL-TPSGKKE----PVKVRNNKDGTYDVACV 1928
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAI 128
FVP GEH++ + + +P SP+ + V A+
Sbjct: 2470 FVPVEPGEHKIRIKKEGKDVPGSPYSVMVEAAEAV 2504
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV 370
YA+ FTP+ P+ + E+ NG+HV SP V
Sbjct: 416 YAVEFTPKVPQKYIAEVTINGEHVSNSPLELEV 448
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
+G TY SFTP + H V + + + SPF+ HV++P
Sbjct: 617 KGDGTYCASFTPSESGNHEVAIEIHKKPIKHSPFLVHVASP 657
>SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09)
Length = 124
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
TY +S+TP+ H V + H+ GSPF +V P
Sbjct: 8 TYGVSYTPQSTGMHKVSVTVRDKHIQGSPFKVNVMNP 44
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETM 191
+ F P+++G H ++V +++ PI SPF + V + ++K V G P F
Sbjct: 1077 YNVTFTPQSLGYHSVSVFVNNNPIKNSPFTVDVRE--RYQLKQVFSAVGGSPEQFQQPRA 1134
Query: 192 AAGPGNLEVTV 224
A N E+ V
Sbjct: 1135 VAASLNGELAV 1145
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +3
Query: 135 KDVAHGTVGKPVTFLVETMAAGPGNLEVTVNG-GRVPTAAARKELTHTPSASR 290
KD + GT G+P L + GP + VT G GR P H +R
Sbjct: 2067 KDASQGTTGRPRRLLPQAPVGGPVTVSVTATGPGRGPIVRVTTTTVHVVPRAR 2119
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
G TYA+ + P +P + + + G H+ SPF V+ P
Sbjct: 612 GKSTYAVKYLPSNPGEYVISVLHCGAHILRSPFYLTVTEP 651
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +3
Query: 135 KDVAHGTVGKPVTFLVETMAAGPGNLEVTVNG-GRVPTAAARKELTHTPSASR 290
KD + GT G+P L + GP + VT G GR P H +R
Sbjct: 721 KDASQGTTGRPRRLLPQAPVGGPVTVSVTATGPGRGPIVRVTTTTVHVVPRAR 773
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGA 397
TY +++TP +T+ + G+ + GSPF V+ A + A
Sbjct: 434 TYKVNYTPLKTGTYTINVTVRGEEIRGSPFKVFVATRAEYLQA 476
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHL-----KVYDVSAIRVKDVAHGTVG 161
+ + P VG++++ V I S P+ SPF++ K D S + + + GT G
Sbjct: 558 YHVTYTPTLVGQYQIAVNIRSFPVSGSPFYINVPYDKARDYSQLDIPQLTFGTSG 612
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVI 391
Y ++TP D + + + NG+HV GSPF V + ++
Sbjct: 436 YEFTYTPPDDGYYKLSVTVNGEHVRGSPFQLSVRSKVDLV 475
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 266 HTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV 370
H +S+TPR H + + G HV SP+ HV
Sbjct: 488 HILTVSYTPRIHGEHEITILARGQHVDESPYHVHV 522
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAAGP 203
+ PR GEH + +L + SP+H+ V + + T PV + + +G
Sbjct: 494 YTPRIHGEHEITILARGQHVDESPYHVHV------KKGHMNFATKNTPVCLRISSKGSGL 547
Query: 204 GNLE 215
G E
Sbjct: 548 GEAE 551
>SB_52869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVI 391
Y ++TP D + + + NG+HV GSPF V + ++
Sbjct: 383 YEFTYTPPDEGCYQLSVTVNGEHVRGSPFQLSVRSKVDLV 422
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVI 391
Y ++TP D + + + NG+HV GSPF V + ++
Sbjct: 390 YEFTYTPPDEGCYQLSVTVNGEHVRGSPFQLSVRSKVDLV 429
>SB_58327| Best HMM Match : Filamin (HMM E-Value=1.9e-05)
Length = 141
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 42 GEHRLNVLIDSVPIPASPFHLKVY-DVSAIRV--KDVAHGTVGKPVTFLVETMAAGPGNL 212
G H++++ +P SPF++ V DVS +V + + + + KP F++ + N+
Sbjct: 73 GRHKVSITHVGEHLPDSPFYVDVLEDVSDTQVSGQGLKNAVILKPAEFIIRVHGSSEANV 132
Query: 213 EVTVNG 230
T G
Sbjct: 133 TATAEG 138
>SB_29541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y ++TP D + + + NG+HV GSPF
Sbjct: 383 YEFTYTPPDEGCYQLSVTVNGEHVRGSPF 411
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV 370
TY ++ P + + + + NG+HV GSPF V
Sbjct: 435 TYGSTYIPHEDGDYKLSVTVNGEHVRGSPFKLRV 468
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -2
Query: 86 RNGHRVDKYVESVFPDGARHELS 18
RN R+ KY+ES+FPDG +H+L+
Sbjct: 163 RNIGRIRKYLESIFPDG-KHDLN 184
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y ++TP D + + ++ NG++V GSPF
Sbjct: 438 YEFTYTPPDDGDYELSVKVNGENVRGSPF 466
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF-VC 364
Y FTP+ P + E++ NG H+ SP +C
Sbjct: 507 YQAIFTPKVPGKYKTEVKINGRHISNSPMEIC 538
>SB_51111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 498 LAGPSTSTCGDVGESTLNVYASPTDTFSGGSPDPAP 391
+AGP+ GD G ST S +TF G P AP
Sbjct: 191 IAGPNLVKVGDFGFSTTATKESALNTFCGSPPYAAP 226
>SB_59387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 15 RAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV--YDVSAIRVKD 140
R + P+ GE++L + V +P SPF +KV D S++ +D
Sbjct: 745 RVTYFPKVEGEYQLAIKWRGVHVPGSPFLVKVGENDASSVSHED 788
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV 370
+ +++ P+ + + +++ G HVPGSPF+ V
Sbjct: 744 HRVTYFPKVEGEYQLAIKWRGVHVPGSPFLVKV 776
>SB_13763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 39 VGEHRLNVLIDSVPIPASPFHLKVYDVSAIR 131
VG+ L I P + PFH K Y+++++R
Sbjct: 132 VGDSALGTNIKPAPYSSCPFHFKSYEINSLR 162
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 218 DGEWRTGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPAR 385
D R D + TY +S+TP ++ +R G+ + G PFV V R
Sbjct: 415 DDNRRVNVDVIVDRRDGTYEVSYTPMQRGTVSINVRVMGEAIGGCPFVVPVVGSLR 470
>SB_7118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 FLVETMAAGPGNLEVTVNGGRVPTAAARKELTHTPSASRR-GIR 302
FLV+T AGPG L++ ++G P A + E+ + R G+R
Sbjct: 136 FLVDTKGAGPGTLKIRIHG---PKGAFKVEMYRDTTKDRTIGVR 176
>SB_57460| Best HMM Match : Folate_rec (HMM E-Value=0.03)
Length = 190
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 74 CAHSGQSLPSKGIRCISYKSQGCRARYCR*TCHFFSGDNGRW 199
C H+ + KG+ ++ SQ CR C+F S + RW
Sbjct: 60 CRHTEVTSVFKGMMALNEASQDCRNHMNYLMCYFCSPEQERW 101
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/88 (23%), Positives = 36/88 (40%)
Frame = -3
Query: 268 VSSLRAAAVGTRPPFTVTSKFPGPAAIVSTKKVTGLPTVPCATSLTLIADTSYTFRWKGL 89
+ +++AAA TVTS A + +T VT TV ++T A + T
Sbjct: 633 IVTVKAAAATATATVTVTSTVTATATVTAT--VTATATVTATVTVTATATATATVTVTAT 690
Query: 88 AGMGTESISTLSLCSPTARGTNSARKAA 5
A + + +T + + T +A A
Sbjct: 691 ATVTATATATATATATATAATTTATATA 718
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 314 VELRFNGDH--VPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTFSVDSPTSPHVEVL 487
+E RF+ +P P H+ AP +V G G P + Y + SP++ + +
Sbjct: 749 IEARFHAQQHGMPPQPNTTHMQAPGQVPFPGYGAPQGQQQNPYPYKMVIQSPSAIQQDTM 808
Query: 488 GP 493
P
Sbjct: 809 QP 810
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 6 AAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVE 185
+ + + P G+H L V+I I SPF L+V + + DV G P +L +
Sbjct: 373 STYTVTYTPSMKGDHELMVMIREKQIKDSPFDLQVGNTRS--PFDVQVSNTGIPF-YLHK 429
Query: 186 TMAAGPGNLEVTVNG 230
P +L+V G
Sbjct: 430 CHTGSPFDLQVGNTG 444
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPF---VCHVSAPARVIGAGSGEP--PEKVSVG 433
TY +++TP H + + + SPF V + +P V + +G P K G
Sbjct: 374 TYTVTYTPSMKGDHELMVMIREKQIKDSPFDLQVGNTRSPFDVQVSNTGIPFYLHKCHTG 433
Query: 434 DAYTFSVDSPTSPHVEVLGPARRP 505
+ V + SP +G R P
Sbjct: 434 SPFDLQVGNTGSPFDLQVGKTRSP 457
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
Y + + R P + +++ G H+ SPF V P
Sbjct: 361 YEVKYIARVPGIYKIQVEIGGQHIKDSPFNVEVKQP 396
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y + P D + + ++ NG++V GSPF
Sbjct: 447 YEFKYMPPDDGDYELSVKVNGENVRGSPF 475
>SB_7015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 116 IVYL*MEGTGRNGHRVDKYVESVFPDGARHELSSE 12
IVY + GTG G + Y+ES PD +H L ++
Sbjct: 315 IVYR-LSGTGSVGATIRVYIESYEPDVTKHMLDAQ 348
>SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 135 KDVAHGTVGKPVTFLVETMAAG--PGNLEVTVNGGRVPTAAARKELTHTPSASRRGIRGL 308
K++ G++ K + L+ +AA PG+++ TV + A +++ TPSA+
Sbjct: 211 KEILEGSL-KAIMRLILALAAHFKPGSVKQTVQNPSLHAAPTGRKVARTPSAAAAAAGAA 269
Query: 309 TPLSCVSTAITCLAVHSCVTCRRQRA 386
++ S A + H ++ RA
Sbjct: 270 AAIAEASRAAANVGRHIPSRLKKHRA 295
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +2
Query: 413 PEKVSVGDAYTFSVDSPTSPHVEVLGP 493
P+++ +GD+ FS+D+ +P+V + P
Sbjct: 225 PQQLQIGDSLNFSMDANMAPYVPGIRP 251
>SB_27213| Best HMM Match : DUF1416 (HMM E-Value=0.18)
Length = 752
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 84 PASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAAGPGNLEVTVNG 230
P++ +H VY++ R AHG + VTF +M + +E V+G
Sbjct: 376 PSARWH-DVYEIEPQRASIPAHGHIYATVTFCPPSMQSYSAIMEAAVDG 423
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,770,761
Number of Sequences: 59808
Number of extensions: 478640
Number of successful extensions: 1822
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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