BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0824 (594 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 31 0.037 M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 28 0.26 AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 26 1.1 AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 25 1.4 AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 2.4 AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 25 2.4 AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 2.4 AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 4.3 AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 23 7.4 DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 9.8 AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding pr... 23 9.8 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 9.8 AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 9.8 >AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase protein. Length = 1022 Score = 30.7 bits (66), Expect = 0.037 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 537 YGFFSRYLHRTGLLAGPSTSTCGDVGES 454 +GFF +LHR G + P CGD ++ Sbjct: 901 HGFFRSHLHRMGYVPSPVCPACGDENQT 928 >M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 1222 Score = 27.9 bits (59), Expect = 0.26 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -3 Query: 418 LRRLARSCTDHARWRRHVTH-EWTARHVIAVETQL--NGVRPRIPR-READGVCVSSLRA 251 +R L DH +WR HVT A V+A T+L N PR + R V S LR Sbjct: 790 IRYLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRLLAYVAESVLRY 849 Query: 250 AA 245 AA Sbjct: 850 AA 851 >AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase protein. Length = 1248 Score = 25.8 bits (54), Expect = 1.1 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Frame = -3 Query: 430 NRHLLRRLARSCTDHARWRRHVTHE-WTARHVIAVETQL--NGVRPRI-PRREADGVCVS 263 ++ +R L DH WR HVT A V+ V T + N PR+ RR GV + Sbjct: 730 SKQAIRYLGVMIHDHFLWRPHVTMAVEKANRVVKVVTNVMRNHSGPRVAKRRLLAGVSEA 789 Query: 262 SLRAAA 245 +R A Sbjct: 790 IIRYGA 795 >AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase protein. Length = 1009 Score = 25.4 bits (53), Expect = 1.4 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -1 Query: 591 DINR---HK*DGVPF--ARLIFTYGFFSRYLHRTGLLAGPSTSTCGDVGESTLNVY 439 D+NR + GV F ++ + ++GF++ LHR L P C + ++ ++ Sbjct: 873 DVNRWISRRFGGVDFFLSQFLSSHGFYAYQLHRMQLTGSPLCDACEEPEDAEHTIF 928 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 24.6 bits (51), Expect = 2.4 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -1 Query: 249 LQSVPVRHSPSPLNSQDQRPLSPLK 175 ++ +P+R P LNS ++ L+P K Sbjct: 1902 IRVLPIREPPVKLNSNNETALTPYK 1926 >AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase protein. Length = 973 Score = 24.6 bits (51), Expect = 2.4 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -1 Query: 537 YGFFSRYLHRTGLLAGPSTSTCGDVGESTLNV 442 +G F YLH+ + P C + EST +V Sbjct: 890 HGCFRSYLHKYRHASSPDCPACVSIVESTEHV 921 >AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase protein. Length = 1173 Score = 24.6 bits (51), Expect = 2.4 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -1 Query: 555 ARLIFTYGFFSRYLHRTGLLAGPSTSTCGDVGES 454 +++I +GFF +YL + P C V ES Sbjct: 936 SQIISGHGFFRKYLADMKFTSSPDCPNCPGVRES 969 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 23.8 bits (49), Expect = 4.3 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = -3 Query: 253 AAAVGTRPPFTVTSKFPGPAAIVSTKKVTGLPTVPCATSLTLIADTSYTFRWKGLAGMGT 74 AAA G PP + P A T++ LP P A S + T ++ + + + Sbjct: 913 AAATGPPPPTHRLEQPPQVVAAAPTQQQP-LPPAPAAASSAGVQPTEHSVNSTNVTSINS 971 Query: 73 ESIST 59 S S+ Sbjct: 972 SSSSS 976 >AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase protein. Length = 1168 Score = 23.0 bits (47), Expect = 7.4 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = -3 Query: 430 NRHLLRRLARSCTDHARWRRHVTHEWTARHVIAVETQLNGV 308 ++ +R L DH WR HV E A + V L G+ Sbjct: 736 SKRSIRYLGVMLHDHLSWRPHV--EMVADKALRVVRALRGI 774 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 22.6 bits (46), Expect = 9.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 252 PLQSVPVRHSPSPLNSQDQRPLSPLKK 172 P+ S+PVR SP P + P +P KK Sbjct: 363 PVPSLPVRSSPEPSPVLLRSP-TPAKK 388 >AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding protein AgamOBP8 protein. Length = 176 Score = 22.6 bits (46), Expect = 9.8 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +3 Query: 462 LRHRTSRCLAPPGDPSCASIC*R 530 +R TSRCL P P C R Sbjct: 138 IRSETSRCLREPPAPDSGGGCLR 160 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 22.6 bits (46), Expect = 9.8 Identities = 10/38 (26%), Positives = 17/38 (44%) Frame = -1 Query: 555 ARLIFTYGFFSRYLHRTGLLAGPSTSTCGDVGESTLNV 442 ++++ +G+F YLH G C ES +V Sbjct: 926 SQVLTGHGYFREYLHVCGFAPSAECPRCPGSVESVAHV 963 >AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase protein. Length = 988 Score = 22.6 bits (46), Expect = 9.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 79 GTESISTLSLCSPTARGTNSAR 14 G SI +S CSP+ G N+ R Sbjct: 175 GRNSIVDVSFCSPSLVGDNNWR 196 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 685,682 Number of Sequences: 2352 Number of extensions: 15545 Number of successful extensions: 52 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 52 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 57188952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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