Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0824
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 47 9e-06
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 47 9e-06
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 47 9e-06
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 33 0.15
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF100304-4|AAC68910.1| 568|Caenorhabditis elegans Gex interacti... 29 1.9
AF100304-2|AAU20837.1| 564|Caenorhabditis elegans Gex interacti... 29 1.9
AF100304-1|AAC68913.1| 545|Caenorhabditis elegans Gex interacti... 29 1.9
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.3
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 27 7.6
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 27 7.6
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 27 7.6
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 27 7.6
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 7.6
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLV 182
P + F P VG+H ++V VP+ SPF + YD + I+V + G + KPV F V
Sbjct: 1201 PGHMQINFTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGAIPKGLLDKPVYFTV 1260
Query: 183 ETMAAGPGNLEVTVNGGRVPTAA 251
+ AG GNLEV V GRVP+ A
Sbjct: 1261 DASEAGVGNLEVAVCEGRVPSMA 1283
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 18 AEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAA 197
A +VP+ VG H +++ + PI SPF K YD + A+ VGKP TF+++ +
Sbjct: 1386 ATYVPKCVGNHLIDIFLQGEPIAGSPFTAKAYDARKTVLVPPANAVVGKPATFVIDAARS 1445
Query: 198 GPGNLEVTVN 227
G GN+E+ V+
Sbjct: 1446 GAGNMEIIVS 1455
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSG 406
G H Y ISF P++ HT+ +RFN + VPGSPF+C + A A+ G+G
Sbjct: 1287 GHHKYDISFVPKEDVDHTITVRFNNEPVPGSPFLCQLVATAQATATGAG 1335
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGA 397
+G + +SFTP+D + HT+ ++FNG VPGSP +C VS+ V A
Sbjct: 1468 EGQARFKVSFTPQDAKDHTISVKFNGISVPGSPLICSVSSAGSVPAA 1514
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAH-GTVGKPVTFLVET 188
+ F P VG H++ ++ + P SPF ++VYD S I V ++ + + V F V+
Sbjct: 958 YEISFKPTEVGTHKVFAYVNDMQHPLSPFAVRVYDASEIIVGEIPNQSNLNDTVEFTVDA 1017
Query: 189 MAAGPGNLEVTV---NGGRVPTAAARKE 263
AG GNLE+ + +G +P+ A+ E
Sbjct: 1018 GRAGFGNLEMAIKDADGVIIPSHVAQLE 1045
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFL-VE 185
++ EF P +G H + V VP+P SPF +V D + ++ ++ + + T + V+
Sbjct: 1618 SYWVEFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGLSDQVLLRHATTINVD 1677
Query: 186 TMAAGPGNLEVTVNGGRVPTAA-ARKELTHTPSASRR 293
AG G L+V + PT + R E+ +P R
Sbjct: 1678 RRNAGNGELQVEITD---PTGSPLRTEMLKSPGGEDR 1711
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
TYA+ P + HT+ ++++ +HV GSPFV HVS P
Sbjct: 2124 TYALCVRPAEIGKHTLVIKYDDEHVKGSPFVVHVSLP 2160
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 236 GTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARV-IGA 397
GTD + H I+FTP H +++R+ G V GSPF C PA++ +GA
Sbjct: 1193 GTDIVEIEPGHMQ-INFTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGA 1246
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
+Y + FTP HT+E+ F VPGSPF V P V G ++V + A T
Sbjct: 1618 SYWVEFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGLS---DQVLLRHATTI 1674
Query: 449 SVDSPTSPH----VEVLGPARRPVLCKYLLKKP 535
+VD + + VE+ P P+ + +LK P
Sbjct: 1675 NVDRRNAGNGELQVEITDPTGSPLRTE-MLKSP 1706
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
+ I+ T + HT+E+RFNG+HV GSP+
Sbjct: 20 FLINITNNNSMTHTIEMRFNGEHVSGSPW 48
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 30 PRAVGEHRLNVLIDSVPIPASPFHLKVY---DVSAIRV--KDVAHGTVGK-PVTFLVETM 191
P +G+H L + D + SPF + V D S +RV V HG + F+VET
Sbjct: 2131 PAEIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKVRVYGPGVEHGILSLFKSNFVVETR 2190
Query: 192 AAGPGNLEVTVNG 230
AG G L V V G
Sbjct: 2191 GAGAGQLTVRVRG 2203
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFV 361
T + P++P + VE++++G+HVPGSPF+
Sbjct: 2221 TIHCKYEPKEPGDYQVEVKWHGEHVPGSPFL 2251
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDV---AHGT----VGKPVTFLV 182
F P G + +++ ++ PI SPF + V D + + V D+ GT +G +F V
Sbjct: 1806 FYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVIVNDLDMDRDGTLLLRLGHSNSFDV 1865
Query: 183 ETMAAGPGNLEVTV 224
+ AAGPG L V
Sbjct: 1866 DATAAGPGKLRAEV 1879
Score = 34.7 bits (76), Expect = 0.050
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 233 TGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEP 412
T D + + Y ISF P + H V N P SPF V + +I GE
Sbjct: 945 TEVDTKVKKSSSKYEISFKPTEVGTHKVFAYVNDMQHPLSPFAVRVYDASEII---VGEI 1001
Query: 413 PEKVSVGDAYTFSVDS 460
P + ++ D F+VD+
Sbjct: 1002 PNQSNLNDTVEFTVDA 1017
Score = 34.7 bits (76), Expect = 0.050
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF-VCHVSAP 379
G+ + ++FTP PHTV + FN + + SPF V V AP
Sbjct: 1047 GSAKFLVTFTPATKGPHTVNITFNKEVLKNSPFEVNIVDAP 1087
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVI 391
T + F P + + V + FN + GSPF +V P +VI
Sbjct: 1801 TSEVVFYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVI 1841
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARV 388
G + Y ++TP + + + +NG HV GSPF A +
Sbjct: 2026 GHNVYKATYTPLTGGTYELHILWNGKHVKGSPFAVSADTSAHL 2068
Score = 30.7 bits (66), Expect = 0.82
Identities = 32/110 (29%), Positives = 49/110 (44%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETM 191
+ AE+ VGEH L V I + SP + V + + G VTF+ +
Sbjct: 124 YTAEYEIEQVGEHHLTVWIAGRKVDGSPLSVAV-NQGKVPNNVQMQGAGRCLVTFIPQ-- 180
Query: 192 AAGPGNLEVTVNGGRVPTAAARKELTHTPSASRRGIRGLTPLSCVSTAIT 341
AG ++VT NG +V + E+ ++ LTP + VSTAI+
Sbjct: 181 HAGTYVIDVTFNGEQVHGCPIKVEIL-PKQVGQQIHANLTP-TAVSTAIS 228
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSP 355
QGA ++F P+ + +++ FNG+ V G P
Sbjct: 168 QGAGRCLVTFIPQHAGTYVIDVTFNGEQVHGCP 200
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 6 AAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYD 116
A F F P G H +N+ + + SPF + + D
Sbjct: 1049 AKFLVTFTPATKGPHTVNITFNKEVLKNSPFEVNIVD 1085
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPF 98
FVP+ +H + V ++ P+P SPF
Sbjct: 1295 FVPKEDVDHTITVRFNNEPVPGSPF 1319
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 15 RAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHG---TVGKPVTFLVE 185
R F+P G H++NV + IP P + V + V A +G+P + + +
Sbjct: 1711 RITFLPNQTGPHKINVKVAGFQIPGYPQTILVSEQEKPAVYGAAVDQSIKIGEPASLIFD 1770
Query: 186 TMAAGPGNLEVTVNG 230
G L++ G
Sbjct: 1771 PKKTN-GGLKIHATG 1784
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLV 182
P + F P VG+H ++V VP+ SPF + YD + I+V + G + KPV F V
Sbjct: 1201 PGHMQINFTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGAIPKGLLDKPVYFTV 1260
Query: 183 ETMAAGPGNLEVTVNGGRVPTAA 251
+ AG GNLEV V GRVP+ A
Sbjct: 1261 DASEAGVGNLEVAVCEGRVPSMA 1283
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 18 AEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAA 197
A +VP+ VG H +++ + PI SPF K YD + A+ VGKP TF+++ +
Sbjct: 1386 ATYVPKCVGNHLIDIFLQGEPIAGSPFTAKAYDARKTVLVPPANAVVGKPATFVIDAARS 1445
Query: 198 GPGNLEVTVN 227
G GN+E+ V+
Sbjct: 1446 GAGNMEIIVS 1455
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSG 406
G H Y ISF P++ HT+ +RFN + VPGSPF+C + A A+ G+G
Sbjct: 1287 GHHKYDISFVPKEDVDHTITVRFNNEPVPGSPFLCQLVATAQATATGAG 1335
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGA 397
+G + +SFTP+D + HT+ ++FNG VPGSP +C VS+ V A
Sbjct: 1468 EGQARFKVSFTPQDAKDHTISVKFNGISVPGSPLICSVSSAGSVPAA 1514
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAH-GTVGKPVTFLVET 188
+ F P VG H++ ++ + P SPF ++VYD S I V ++ + + V F V+
Sbjct: 958 YEISFKPTEVGTHKVFAYVNDMQHPLSPFAVRVYDASEIIVGEIPNQSNLNDTVEFTVDA 1017
Query: 189 MAAGPGNLEVTV---NGGRVPTAAARKE 263
AG GNLE+ + +G +P+ A+ E
Sbjct: 1018 GRAGFGNLEMAIKDADGVIIPSHVAQLE 1045
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +3
Query: 18 AEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETMAA 197
A + P+ GEH L++L+ IP SPF + V D SA+RV + + VG F V+ +
Sbjct: 1783 AVWTPKVEGEHELSILVAGEQIPGSPFPIHVLDPSAVRVIGLKNAPVGVEQQFSVDYTNS 1842
Query: 198 GPGNLEVTVNGG 233
G V V G
Sbjct: 1843 GASIASVEVRHG 1854
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFL-VE 185
++ EF P +G H + V VP+P SPF +V D + ++ ++ + + T + V+
Sbjct: 2036 SYWVEFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGLSDQVLLRHATTINVD 2095
Query: 186 TMAAGPGNLEVTVNGGRVPTAA-ARKELTHTPSASRR 293
AG G L+V + PT + R E+ +P R
Sbjct: 2096 RRNAGNGELQVEITD---PTGSPLRTEMLKSPGGEDR 2129
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAP 379
TYA+ P + HT+ ++++ +HV GSPFV HVS P
Sbjct: 2542 TYALCVRPAEIGKHTLVIKYDDEHVKGSPFVVHVSLP 2578
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 236 GTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARV-IGA 397
GTD + H I+FTP H +++R+ G V GSPF C PA++ +GA
Sbjct: 1193 GTDIVEIEPGHMQ-INFTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGA 1246
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
+Y + FTP HT+E+ F VPGSPF V P V G ++V + A T
Sbjct: 2036 SYWVEFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGLS---DQVLLRHATTI 2092
Query: 449 SVDSPTSPH----VEVLGPARRPVLCKYLLKKP 535
+VD + + VE+ P P+ + +LK P
Sbjct: 2093 NVDRRNAGNGELQVEITDPTGSPLRTE-MLKSP 2124
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
+ I+ T + HT+E+RFNG+HV GSP+
Sbjct: 20 FLINITNNNSMTHTIEMRFNGEHVSGSPW 48
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +3
Query: 30 PRAVGEHRLNVLIDSVPIPASPFHLKVY---DVSAIRV--KDVAHGTVGK-PVTFLVETM 191
P +G+H L + D + SPF + V D S +RV V HG + F+VET
Sbjct: 2549 PAEIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKVRVYGPGVEHGILSLFKSNFVVETR 2608
Query: 192 AAGPGNLEVTVNG 230
AG G L V V G
Sbjct: 2609 GAGAGQLTVRVRG 2621
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFV 361
T + P++P + VE++++G+HVPGSPF+
Sbjct: 2639 TIHCKYEPKEPGDYQVEVKWHGEHVPGSPFL 2669
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDV---AHGT----VGKPVTFLV 182
F P G + +++ ++ PI SPF + V D + + V D+ GT +G +F V
Sbjct: 2224 FYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVIVNDLDMDRDGTLLLRLGHSNSFDV 2283
Query: 183 ETMAAGPGNLEVTV 224
+ AAGPG L V
Sbjct: 2284 DATAAGPGKLRAEV 2297
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 284 FTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTFSVDSP 463
+TP+ H + + G+ +PGSPF HV P+ V G P VG FSVD
Sbjct: 1785 WTPKVEGEHELSILVAGEQIPGSPFPIHVLDPSAVRVIGLKNAP----VGVEQQFSVDYT 1840
Query: 464 TS 469
S
Sbjct: 1841 NS 1842
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVA--HGTVGKPVTF 176
P F P G H++ V+ID VP+ P+ + + + +R A + F
Sbjct: 1867 PGQLLCTFTPFVDGPHQVEVIIDGVPLSDGPYEVFISHLGTVRASGDALRKAQRARTARF 1926
Query: 177 LVETMAAGPGNLEVTVNGGRVPTAAARKELTHT 275
V + G L+V V+ G+ P + + T
Sbjct: 1927 EVINVEQNRGELDVMVS-GKTPRECQKSHIPKT 1958
Score = 34.7 bits (76), Expect = 0.050
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +2
Query: 233 TGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEP 412
T D + + Y ISF P + H V N P SPF V + +I GE
Sbjct: 945 TEVDTKVKKSSSKYEISFKPTEVGTHKVFAYVNDMQHPLSPFAVRVYDASEII---VGEI 1001
Query: 413 PEKVSVGDAYTFSVDS 460
P + ++ D F+VD+
Sbjct: 1002 PNQSNLNDTVEFTVDA 1017
Score = 34.7 bits (76), Expect = 0.050
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF-VCHVSAP 379
G+ + ++FTP PHTV + FN + + SPF V V AP
Sbjct: 1047 GSAKFLVTFTPATKGPHTVNITFNKEVLKNSPFEVNIVDAP 1087
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVI 391
T + F P + + V + FN + GSPF +V P +VI
Sbjct: 2219 TSEVVFYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVI 2259
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARV 388
G + Y ++TP + + + +NG HV GSPF A +
Sbjct: 2444 GHNVYKATYTPLTGGTYELHILWNGKHVKGSPFAVSADTSAHL 2486
Score = 30.7 bits (66), Expect = 0.82
Identities = 32/110 (29%), Positives = 49/110 (44%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHGTVGKPVTFLVETM 191
+ AE+ VGEH L V I + SP + V + + G VTF+ +
Sbjct: 124 YTAEYEIEQVGEHHLTVWIAGRKVDGSPLSVAV-NQGKVPNNVQMQGAGRCLVTFIPQ-- 180
Query: 192 AAGPGNLEVTVNGGRVPTAAARKELTHTPSASRRGIRGLTPLSCVSTAIT 341
AG ++VT NG +V + E+ ++ LTP + VSTAI+
Sbjct: 181 HAGTYVIDVTFNGEQVHGCPIKVEIL-PKQVGQQIHANLTP-TAVSTAIS 228
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 257 QGAHTYAISFTPRDPRPHTVELRFNGDHVPGSP 355
QGA ++F P+ + +++ FNG+ V G P
Sbjct: 168 QGAGRCLVTFIPQHAGTYVIDVTFNGEQVHGCP 200
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 6 AAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYD 116
A F F P G H +N+ + + SPF + + D
Sbjct: 1049 AKFLVTFTPATKGPHTVNITFNKEVLKNSPFEVNIVD 1085
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPF 98
FVP+ +H + V ++ P+P SPF
Sbjct: 1295 FVPKEDVDHTITVRFNNEPVPGSPF 1319
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 15 RAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRVKDVAHG---TVGKPVTFLVE 185
R F+P G H++NV + IP P + V + V A +G+P + + +
Sbjct: 2129 RITFLPNQTGPHKINVKVAGFQIPGYPQTILVSEQEKPAVYGAAVDQSIKIGEPASLIFD 2188
Query: 186 TMAAGPGNLEVTVNG 230
G L++ G
Sbjct: 2189 PKKTN-GGLKIHATG 2202
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV-----YDVSAIRVK--DVAHGTVGKP 167
++ FVP+ G H ++V +D P+ SPF L+V D +AI + GT G+
Sbjct: 695 SYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRVGGKDLCDPTAISASGDGLVKGTTGQK 754
Query: 168 VTFLVETMAAGPGNLEVTVNG 230
F++ T AG G L V ++G
Sbjct: 755 CEFVINTANAGAGILTVQMDG 775
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLK-----VYDVSAIRV--KDVAHGTVGKPVTFLV 182
F PR GEH + V D +P +PF +K V D S + V A G + LV
Sbjct: 316 FTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGKAKGITLQANELLV 375
Query: 183 ETMAAGPGNLEVTVNG 230
+T AG G L V+V G
Sbjct: 376 DTSKAGYGGLSVSVQG 391
Score = 34.7 bits (76), Expect = 0.050
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y + +TP P + +++NG H PGSPF
Sbjct: 790 YKVRYTPLAPGSYFASVKYNGIHAPGSPF 818
Score = 31.9 bits (69), Expect = 0.35
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPF-----VCHVSAPARVIGAGSGEPPEKVSVGDAY 442
+SFTPR+ H + ++ +G VP +PF V ++V +GSG+ K A
Sbjct: 314 VSFTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGK--AKGITLQAN 371
Query: 443 TFSVDSPTSPH----VEVLGPARRPVLCK 517
VD+ + + V V GP++ + CK
Sbjct: 372 ELLVDTSKAGYGGLSVSVQGPSKAELTCK 400
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF 358
G Y + FTP+ HT+ + + HV GSPF
Sbjct: 501 GQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPF 533
Score = 31.5 bits (68), Expect = 0.47
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVS---AIRVKDVAHGTV-GKPVT-- 173
++ +F P+ G H L+V+ + SPF V S A +V+ G V G+ T
Sbjct: 505 YQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGGAHKVRAAGQGVVRGETGTFN 564
Query: 174 -FLVETMAAGPGNLEVTVNG 230
F + AG G + VT+ G
Sbjct: 565 AFNIYHREAGVGAVAVTIEG 584
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPA 382
+ + P + V ++FN H+P SPF ++ APA
Sbjct: 602 VDYKVATPGEYVVAVKFNDQHIPDSPFKVYI-APA 635
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
T + +TP+ H + + NG + G+P +V A G + VG+ TF
Sbjct: 133 TILVKYTPKVHGSHELSILQNGAQLQGTPIKFYVDAYGDGWATVYGPGLQNAVVGEPATF 192
Query: 449 SVDSPTSP----HVEVLGPARRPV 508
+V + S V + GPA+ +
Sbjct: 193 TVCAKGSQAKELSVSIEGPAKSQI 216
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV-----YDVSAIRVK--DVAHGTVGKP 167
++ FVP+ G H ++V +D P+ SPF L+V D +AI + GT G+
Sbjct: 644 SYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRVGGKDLCDPTAISASGDGLVKGTTGQK 703
Query: 168 VTFLVETMAAGPGNLEVTVNG 230
F++ T AG G L V ++G
Sbjct: 704 CEFVINTANAGAGILTVQMDG 724
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLK-----VYDVSAIRV--KDVAHGTVGKPVTFLV 182
F PR GEH + V D +P +PF +K V D S + V A G + LV
Sbjct: 265 FTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGKAKGITLQANELLV 324
Query: 183 ETMAAGPGNLEVTVNG 230
+T AG G L V+V G
Sbjct: 325 DTSKAGYGGLSVSVQG 340
Score = 34.7 bits (76), Expect = 0.050
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y + +TP P + +++NG H PGSPF
Sbjct: 739 YKVRYTPLAPGSYFASVKYNGIHAPGSPF 767
Score = 31.9 bits (69), Expect = 0.35
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPF-----VCHVSAPARVIGAGSGEPPEKVSVGDAY 442
+SFTPR+ H + ++ +G VP +PF V ++V +GSG+ K A
Sbjct: 263 VSFTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGK--AKGITLQAN 320
Query: 443 TFSVDSPTSPH----VEVLGPARRPVLCK 517
VD+ + + V V GP++ + CK
Sbjct: 321 ELLVDTSKAGYGGLSVSVQGPSKAELTCK 349
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF 358
G Y + FTP+ HT+ + + HV GSPF
Sbjct: 450 GQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPF 482
Score = 31.5 bits (68), Expect = 0.47
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVS---AIRVKDVAHGTV-GKPVT-- 173
++ +F P+ G H L+V+ + SPF V S A +V+ G V G+ T
Sbjct: 454 YQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGGAHKVRAAGQGVVRGETGTFN 513
Query: 174 -FLVETMAAGPGNLEVTVNG 230
F + AG G + VT+ G
Sbjct: 514 AFNIYHREAGVGAVAVTIEG 533
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPA 382
+ + P + V ++FN H+P SPF ++ APA
Sbjct: 551 VDYKVATPGEYVVAVKFNDQHIPDSPFKVYI-APA 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
T + +TP+ H + + NG + G+P +V A G + VG+ TF
Sbjct: 82 TILVKYTPKVHGSHELSILQNGAQLQGTPIKFYVDAYGDGWATVYGPGLQNAVVGEPATF 141
Query: 449 SVDSPTSP----HVEVLGPARRPV 508
+V + S V + GPA+ +
Sbjct: 142 TVCAKGSQAKELSVSIEGPAKSQI 165
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKV-----YDVSAIRVK--DVAHGTVGKP 167
++ FVP+ G H ++V +D P+ SPF L+V D +AI + GT G+
Sbjct: 642 SYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRVGGKDLCDPTAISASGDGLVKGTTGQK 701
Query: 168 VTFLVETMAAGPGNLEVTVNG 230
F++ T AG G L V ++G
Sbjct: 702 CEFVINTANAGAGILTVQMDG 722
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 24 FVPRAVGEHRLNVLIDSVPIPASPFHLK-----VYDVSAIRV--KDVAHGTVGKPVTFLV 182
F PR GEH + V D +P +PF +K V D S + V A G + LV
Sbjct: 263 FTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGKAKGITLQANELLV 322
Query: 183 ETMAAGPGNLEVTVNG 230
+T AG G L V+V G
Sbjct: 323 DTSKAGYGGLSVSVQG 338
Score = 34.7 bits (76), Expect = 0.050
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPF 358
Y + +TP P + +++NG H PGSPF
Sbjct: 737 YKVRYTPLAPGSYFASVKYNGIHAPGSPF 765
Score = 31.9 bits (69), Expect = 0.35
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPF-----VCHVSAPARVIGAGSGEPPEKVSVGDAY 442
+SFTPR+ H + ++ +G VP +PF V ++V +GSG+ K A
Sbjct: 261 VSFTPREAGEHLITVKRDGKLVPKAPFKIKVDKTQVGDASKVEVSGSGK--AKGITLQAN 318
Query: 443 TFSVDSPTSPH----VEVLGPARRPVLCK 517
VD+ + + V V GP++ + CK
Sbjct: 319 ELLVDTSKAGYGGLSVSVQGPSKAELTCK 347
Score = 31.9 bits (69), Expect = 0.35
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 260 GAHTYAISFTPRDPRPHTVELRFNGDHVPGSPF 358
G Y + FTP+ HT+ + + HV GSPF
Sbjct: 448 GQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPF 480
Score = 31.5 bits (68), Expect = 0.47
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = +3
Query: 12 FRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVS---AIRVKDVAHGTV-GKPVT-- 173
++ +F P+ G H L+V+ + SPF V S A +V+ G V G+ T
Sbjct: 452 YQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGGAHKVRAAGQGVVRGETGTFN 511
Query: 174 -FLVETMAAGPGNLEVTVNG 230
F + AG G + VT+ G
Sbjct: 512 AFNIYHREAGVGAVAVTIEG 531
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPA 382
+ + P + V ++FN H+P SPF ++ APA
Sbjct: 549 VDYKVATPGEYVVAVKFNDQHIPDSPFKVYI-APA 582
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 TYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTF 448
T + +TP+ H + + NG + G+P +V A G + VG+ TF
Sbjct: 80 TILVKYTPKVHGSHELSILQNGAQLQGTPIKFYVDAYGDGWATVYGPGLQNAVVGEPATF 139
Query: 449 SVDSPTSP----HVEVLGPARRPV 508
+V + S V + GPA+ +
Sbjct: 140 TVCAKGSQAKELSVSIEGPAKSQI 163
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical protein
C23F12.2 protein.
Length = 941
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Frame = +3
Query: 15 RAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYDVSAIRV--KDVAHGTVGKPVTFLVET 188
+ F P G+++++VL + + I SPF L + D S++ V +++ +VGK +F+V
Sbjct: 789 QVSFTPDGAGQYKIHVLFNRMEIKGSPFILDIADASSVSVYGENLRSASVGKTASFMVHA 848
Query: 189 MAAGPGNL--EVTV-NGGRVP 242
+ A ++ VTV +GG+ P
Sbjct: 849 IGAEAKDISAHVTVPSGGKFP 869
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Frame = +3
Query: 9 AFRAEFVPRAVGEHRLNVLIDSVPIPASPF-----HL---------KVYDVSAIRVKDVA 146
++ A F P+ VG R+ +L D I SPF HL +V+D + V +
Sbjct: 683 SYMATFTPQEVGLWRIGILYDGEHIRGSPFACQVYHLDRRSLITRRQVFDSGLVNVYGLD 742
Query: 147 HGTVGKPVTFLVETMAAGPGNLEVTV--NGGRVP 242
G VG+ + F V AG GNL VTV +G +P
Sbjct: 743 VGLVGQELNFSVNASQAGHGNLSVTVFRHGREIP 776
Score = 35.9 bits (79), Expect = 0.022
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 245 CSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHV 370
C+ ++Y +FTP++ + + ++G+H+ GSPF C V
Sbjct: 675 CTVRHQDNSYMATFTPQEVGLWRIGILYDGEHIRGSPFACQV 716
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 272 YAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAGSGEPPEKVSVGDAYTFS 451
+ +SFTP + + + FN + GSPF+ ++ + V + GE SVG +F
Sbjct: 788 HQVSFTPDGAGQYKIHVLFNRMEIKGSPFILDIADASSV--SVYGENLRSASVGKTASFM 845
Query: 452 V 454
V
Sbjct: 846 V 846
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLKVYD-VSAIRVKDVAHGTVG-----K 164
P F +P A +H+++V + V +P +PF +KV + A ++K G G +
Sbjct: 697 PGLFEYTLIPDAPIKHKIDVSVAGVSVPGAPFSVKVKEPTDASKLKIFGPGVDGPVYSKE 756
Query: 165 PVTFLVETMAAGPGNLEVTV 224
P F ++ AGPG +EV +
Sbjct: 757 PTRFTIDATQAGPGAVEVAL 776
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 218 DGEWRTGTDCSGTQGAHTYAISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIG 394
DG RT C Q +SFTP+ P + + + F+ +HVPGSPF + A A ++G
Sbjct: 997 DGPTRTPLHCVDNQDG-ILKMSFTPKQPGLYYLRVMFDNEHVPGSPF--QIVAVAALLG 1052
Score = 35.1 bits (77), Expect = 0.038
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASPFHLK 107
P FR F P VG + ++V +PI SPF L+
Sbjct: 883 PTGFRVRFTPSEVGNYTIDVTYQDIPIERSPFTLQ 917
Score = 33.9 bits (74), Expect = 0.088
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Frame = +2
Query: 278 ISFTPRDPRPHTVELRFNGDHVPGSPFVCHVSAPARVIGAG----SGEPPEKV-SVGDAY 442
+S+TP + V + +G H+ SPFV V+ P + +G KV +VG+
Sbjct: 602 LSYTPTVAGVYKVGVLADGKHIQDSPFVLRVTEPIEGLKPSATRVTGIDESKVYNVGEKI 661
Query: 443 TFSVDS-----PTSPHVEVLGPARRPV 508
F VD+ P VE+L P P+
Sbjct: 662 PFRVDTRLCGVDLVPKVEILDPELNPI 688
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 15 RAEFVPRAVGEHRLNVLIDSVPIPASPFHL 104
+ F P+ G + L V+ D+ +P SPF +
Sbjct: 1015 KMSFTPKQPGLYYLRVMFDNEHVPGSPFQI 1044
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 39 VGEHRLNVLIDSVPIPASPFH-LKVYDVSAIRV--KDVAHGTVGKPVTFLVETMAAGPGN 209
VGEH+L +L D +P+ + +K DV+ + + VG+ F ++ AG G
Sbjct: 18 VGEHKLQLLFDEIPVKEAVVEVIKGTDVNKCKAYGPGLEQAVVGEKAVFELDLDGAGEGA 77
Query: 210 LEVTVNG 230
L + + G
Sbjct: 78 LSMEMRG 84
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 261 PCVPLQSVPVRHSPSPLNSQDQRPLSPLK 175
P P+ S P+RHS S Q+ LSP+K
Sbjct: 164 PTPPVSSTPLRHSAPSFASDSQQFLSPIK 192
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 261 PCVPLQSVPVRHSPSPLNSQDQRPLSPLK 175
P P+ S P+RHS S Q+ LSP+K
Sbjct: 164 PTPPVSSTPLRHSAPSFASDSQQFLSPIK 192
>AF100304-4|AAC68910.1| 568|Caenorhabditis elegans Gex interacting
protein protein4, isoform b protein.
Length = 568
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 448 QRRLAYVTARRGAWPRQETRPVQVSAEETVGENEASKRYT 567
QR++A + +WP E Q+ + +G++ KRYT
Sbjct: 362 QRKVAKQEPKEESWPSHEQSDTQIDHDLDLGDSYNQKRYT 401
>AF100304-2|AAU20837.1| 564|Caenorhabditis elegans Gex interacting
protein protein4, isoform f protein.
Length = 564
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 448 QRRLAYVTARRGAWPRQETRPVQVSAEETVGENEASKRYT 567
QR++A + +WP E Q+ + +G++ KRYT
Sbjct: 358 QRKVAKQEPKEESWPSHEQSDTQIDHDLDLGDSYNQKRYT 397
>AF100304-1|AAC68913.1| 545|Caenorhabditis elegans Gex interacting
protein protein4, isoform a protein.
Length = 545
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 448 QRRLAYVTARRGAWPRQETRPVQVSAEETVGENEASKRYT 567
QR++A + +WP E Q+ + +G++ KRYT
Sbjct: 339 QRKVAKQEPKEESWPSHEQSDTQIDHDLDLGDSYNQKRYT 378
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 456 STLNVYASPTDTFSGGSPDPAPI-TRAGADT*HTNGLPGT*SPLKRSSTV 310
+T YA+P+ T S +P P + T GA T T P SP S V
Sbjct: 229 TTSTAYAAPSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPV 278
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 495 AGPSTST-CGDVGESTLNVYASPTDTFSGGSPDPAPITRAGADT*HTNGLPGT*SPLKRS 319
+GPSTS+ ST++ + P+ T SG S P T +G+ T+G P T S K
Sbjct: 555 SGPSTSSGPSTASRSTVSTTSGPSTT-SGPSTTSGPSTTSGSTKSTTSG-PSTTSG-KNI 611
Query: 318 STV*G 304
STV G
Sbjct: 612 STVSG 616
>Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical
protein F35E8.7 protein.
Length = 288
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 253 AAAVGTRPPFTVTSKFPGPAAIVSTKKVTGLPTVPCATSLTLIADTSY 110
AA T P VT+ PAA+ +T VT A + T A TSY
Sbjct: 204 AAPTTTVAPAVVTTT-AAPAAVTTTAAVTTTTVAAAAATTTAAACTSY 250
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 468 DVGESTLNVYASPTDTFSGGSPDPAPITRAGADT 367
D+G +TL+ Y+S D + +PDP I D+
Sbjct: 2402 DLGAATLDFYSSLVDLLAKCAPDPMAIQAGKGDS 2435
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 468 DVGESTLNVYASPTDTFSGGSPDPAPITRAGADT 367
D+G +TL+ Y+S D + +PDP I D+
Sbjct: 2523 DLGAATLDFYSSLVDLLAKCAPDPMAIQAGKGDS 2556
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASP 95
PA R F+P GE +NV + ++P+ P
Sbjct: 1555 PAVTRRGFIPSTEGEDLVNVELSAIPLDDHP 1585
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 3 PAAFRAEFVPRAVGEHRLNVLIDSVPIPASP 95
PA R F+P GE +NV + ++P+ P
Sbjct: 1534 PAVTRRGFIPSTEGEDLVNVELSAIPLDDHP 1564
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,615,745
Number of Sequences: 27780
Number of extensions: 342305
Number of successful extensions: 1277
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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