BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0823 (699 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 29 2.7 01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 29 2.7 02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 3.5 10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 4.7 08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-44... 29 4.7 07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 4.7 01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 29 4.7 08_02_1167 + 24847689-24848156 28 6.2 07_02_0012 - 11770058-11770770,11770919-11771000,11771064-117710... 28 6.2 06_03_0854 + 25400855-25403741,25406174-25407708 28 6.2 03_02_0036 + 5182345-5183511 28 6.2 02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 28 8.2 01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384 28 8.2 >02_04_0067 - 19425019-19425288,19425393-19425647,19425766-19425937, 19426069-19426302,19426523-19426656,19427663-19427746, 19428355-19428645,19428788-19429120,19429317-19429390, 19429464-19429644,19429993-19430096,19430232-19430392, 19430727-19431040,19431583-19431864,19432431-19432732, 19433176-19433266,19433368-19433421,19438917-19438993, 19439081-19439240,19439410-19439494,19439574-19440130 Length = 1404 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -2 Query: 320 IVLFGLWYSGYLVVTNWSRFGFFSSVAAATSVGLTESSIL 201 I+LFG + L + NW ++GF+ S + +GLT + L Sbjct: 684 ILLFGGFIIPRLSMPNWLKWGFWISPLSYAEIGLTGNEFL 723 >01_06_1519 + 37942389-37943702,37944142-37944266,37944358-37944499, 37944602-37944848,37946139-37946196,37947629-37947913, 37947988-37948120 Length = 767 Score = 29.5 bits (63), Expect = 2.7 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = +3 Query: 405 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEFQKKK 524 +E P AEA S + K EEP AA E +K E +A A ++ K Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAPAEEAK 209 >02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523, 1349385-1349453,1349576-1349629,1350295-1350350, 1350487-1350694,1350978-1351066,1351163-1351187 Length = 243 Score = 29.1 bits (62), Expect = 3.5 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 496 ACTSVFESSG*AAGSSTLISADFASASGISDDF 398 +CT +F+SS +A + ++A FA AS D+F Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96 >10_06_0085 + 10511258-10512327,10512978-10513058,10513318-10513396, 10514160-10514201 Length = 423 Score = 28.7 bits (61), Expect = 4.7 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +1 Query: 67 RRVTGSIF--KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAA 240 RRV+G +F LL+C AA A PVA + P+ +D +K + A Sbjct: 219 RRVSGIVFLTSFAALLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLLKKYQDAL 278 Query: 241 ATEEKKPNLLQLVT 282 ++ + +Q+ T Sbjct: 279 HGHKEVVSAMQVGT 292 >08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-440880, 441218-441381,442237-442312,442502-442587,442706-442861, 442934-443264 Length = 401 Score = 28.7 bits (61), Expect = 4.7 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +1 Query: 139 AMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKPNLLQLVT 282 A PV+E + A ++EV + DS+ P AT+E +L++ T Sbjct: 179 AQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCT 226 >07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879, 3829668-3829826,3829918-3830028,3830173-3830259, 3830359-3830591,3830808-3830886,3831173-3831316, 3831529-3831568,3831667-3831729,3832193-3832224, 3832320-3832361,3832444-3832557 Length = 529 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = +3 Query: 423 EAKSADIKVEEPAAQPEDSKTE--VQATVAEFQKK 521 E++S DIK + +AQP +K E VQAT++ KK Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKK 428 >01_07_0238 + 42209407-42209964,42210039-42210561,42212577-42212665, 42212981-42213191,42213265-42213446,42213573-42213812, 42214691-42214878,42215230-42215323,42215407-42215463, 42215552-42215686,42216460-42216525,42216745-42216858, 42217849-42218010,42218093-42218221,42218323-42218424, 42219428-42219504,42219600-42219957 Length = 1094 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 530 SATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAA 661 SA A GSAD AA + L PN+ S +++P E+A Sbjct: 83 SALQAAGSADPAAASALASLLVILLPNIPSSPSSLPPASASESA 126 >08_02_1167 + 24847689-24848156 Length = 155 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +3 Query: 396 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 497 AK E P+AEA++A VEE AA P + E +A Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140 >07_02_0012 - 11770058-11770770,11770919-11771000,11771064-11771072, 11771630-11771877,11772006-11772183,11772270-11772278 Length = 412 Score = 28.3 bits (60), Expect = 6.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 172 PAQPILEVAPKIDDSVKPTEVAAATE 249 P P E PK+DD +P +VA +TE Sbjct: 222 PLPPPSESPPKVDDDNEPPKVAGSTE 247 >06_03_0854 + 25400855-25403741,25406174-25407708 Length = 1473 Score = 28.3 bits (60), Expect = 6.2 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 527 PSATDAEGSADSAAIIPN----MVKKIDLAPNVESDAAAVPEIKTPEAA 661 PSA A A + ++ PN V LAP + AAA P + P AA Sbjct: 618 PSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAAAAAAPAVAPPAAA 666 >03_02_0036 + 5182345-5183511 Length = 388 Score = 28.3 bits (60), Expect = 6.2 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%) Frame = +1 Query: 34 LNNLCQCFKKRRRVTGSIFK--MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKI 207 L+ + K RRV+ IF +L+C AA A PVA + P+ + I Sbjct: 218 LDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMGKWI 277 Query: 208 DDSVKPTEVAAATEEKKPNLLQLVT 282 D +K + A +++ + +Q+ T Sbjct: 278 DSLLKGYQDALRGQKEVVSAMQVGT 302 >02_04_0114 + 19879468-19880671,19882007-19882179,19882265-19882605, 19882698-19882977,19883070-19883267,19883380-19883652 Length = 822 Score = 27.9 bits (59), Expect = 8.2 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -2 Query: 296 SGYLVVTNWSRFGFFSSVAAATSVGLTESSILGATSRIG*AG 171 +G+L + WS +G SS A + S+++G+T R+ AG Sbjct: 95 AGHLSSSQWSVWGPASSTNAVIKGDTSSSAVVGSTGRVLLAG 136 >01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384 Length = 335 Score = 27.9 bits (59), Expect = 8.2 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 61 KRRRVTGSIFKMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVK 222 KR G + ++ LLLC+A AA + A+P A P P+ E+ + +V+ Sbjct: 96 KRIGSAGDLGWIEYLLLCLAPAAAAAALPCAATSPTPPC-PLRELLREYSAAVR 148 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,627,948 Number of Sequences: 37544 Number of extensions: 277342 Number of successful extensions: 884 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 883 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1792053856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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