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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0823
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259...    29   2.7  
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444...    29   2.7  
02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134...    29   3.5  
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133...    29   4.7  
08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-44...    29   4.7  
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382...    29   4.7  
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126...    29   4.7  
08_02_1167 + 24847689-24848156                                         28   6.2  
07_02_0012 - 11770058-11770770,11770919-11771000,11771064-117710...    28   6.2  
06_03_0854 + 25400855-25403741,25406174-25407708                       28   6.2  
03_02_0036 + 5182345-5183511                                           28   6.2  
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826...    28   8.2  
01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384           28   8.2  

>02_04_0067 -
           19425019-19425288,19425393-19425647,19425766-19425937,
           19426069-19426302,19426523-19426656,19427663-19427746,
           19428355-19428645,19428788-19429120,19429317-19429390,
           19429464-19429644,19429993-19430096,19430232-19430392,
           19430727-19431040,19431583-19431864,19432431-19432732,
           19433176-19433266,19433368-19433421,19438917-19438993,
           19439081-19439240,19439410-19439494,19439574-19440130
          Length = 1404

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 320 IVLFGLWYSGYLVVTNWSRFGFFSSVAAATSVGLTESSIL 201
           I+LFG +    L + NW ++GF+ S  +   +GLT +  L
Sbjct: 684 ILLFGGFIIPRLSMPNWLKWGFWISPLSYAEIGLTGNEFL 723


>01_06_1519 +
           37942389-37943702,37944142-37944266,37944358-37944499,
           37944602-37944848,37946139-37946196,37947629-37947913,
           37947988-37948120
          Length = 767

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 405 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEFQKKK 524
           +E P AEA S + K EEP   AA  E +K E +A  A  ++ K
Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAPAEEAK 209


>02_01_0201 -
           1347868-1347925,1348040-1348135,1348447-1348523,
           1349385-1349453,1349576-1349629,1350295-1350350,
           1350487-1350694,1350978-1351066,1351163-1351187
          Length = 243

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 496 ACTSVFESSG*AAGSSTLISADFASASGISDDF 398
           +CT +F+SS  +A  +  ++A FA AS   D+F
Sbjct: 64  SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96


>10_06_0085 +
           10511258-10512327,10512978-10513058,10513318-10513396,
           10514160-10514201
          Length = 423

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +1

Query: 67  RRVTGSIF--KMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAA 240
           RRV+G +F      LL+C   AA   A PVA       + P+      +D  +K  + A 
Sbjct: 219 RRVSGIVFLTSFAALLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLLKKYQDAL 278

Query: 241 ATEEKKPNLLQLVT 282
              ++  + +Q+ T
Sbjct: 279 HGHKEVVSAMQVGT 292


>08_01_0063 +
           439640-439740,440067-440145,440586-440684,440767-440880,
           441218-441381,442237-442312,442502-442587,442706-442861,
           442934-443264
          Length = 401

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 139 AMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKPNLLQLVT 282
           A PV+E   +  A  ++EV   + DS+ P     AT+E   +L++  T
Sbjct: 179 AQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCT 226


>07_01_0513 +
           3828196-3828309,3828408-3828722,3828823-3828879,
           3829668-3829826,3829918-3830028,3830173-3830259,
           3830359-3830591,3830808-3830886,3831173-3831316,
           3831529-3831568,3831667-3831729,3832193-3832224,
           3832320-3832361,3832444-3832557
          Length = 529

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 423 EAKSADIKVEEPAAQPEDSKTE--VQATVAEFQKK 521
           E++S DIK  + +AQP  +K E  VQAT++   KK
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKK 428


>01_07_0238 +
           42209407-42209964,42210039-42210561,42212577-42212665,
           42212981-42213191,42213265-42213446,42213573-42213812,
           42214691-42214878,42215230-42215323,42215407-42215463,
           42215552-42215686,42216460-42216525,42216745-42216858,
           42217849-42218010,42218093-42218221,42218323-42218424,
           42219428-42219504,42219600-42219957
          Length = 1094

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 530 SATDAEGSADSAAIIPNMVKKIDLAPNVESDAAAVPEIKTPEAA 661
           SA  A GSAD AA        + L PN+ S  +++P     E+A
Sbjct: 83  SALQAAGSADPAAASALASLLVILLPNIPSSPSSLPPASASESA 126


>08_02_1167 + 24847689-24848156
          Length = 155

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 396 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 497
           AK  E P+AEA++A   VEE AA P +   E +A
Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140


>07_02_0012 -
           11770058-11770770,11770919-11771000,11771064-11771072,
           11771630-11771877,11772006-11772183,11772270-11772278
          Length = 412

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 172 PAQPILEVAPKIDDSVKPTEVAAATE 249
           P  P  E  PK+DD  +P +VA +TE
Sbjct: 222 PLPPPSESPPKVDDDNEPPKVAGSTE 247


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 527 PSATDAEGSADSAAIIPN----MVKKIDLAPNVESDAAAVPEIKTPEAA 661
           PSA  A   A + ++ PN     V    LAP   + AAA P +  P AA
Sbjct: 618 PSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAAAAAAPAVAPPAAA 666


>03_02_0036 + 5182345-5183511
          Length = 388

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +1

Query: 34  LNNLCQCFKKRRRVTGSIFK--MKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKI 207
           L+   +  K  RRV+  IF      +L+C   AA   A PVA       + P+  +   I
Sbjct: 218 LDKKVRAIKAWRRVSSIIFATTFAAVLICSVVAAAIAAPPVAAALAAAASIPVGSMGKWI 277

Query: 208 DDSVKPTEVAAATEEKKPNLLQLVT 282
           D  +K  + A   +++  + +Q+ T
Sbjct: 278 DSLLKGYQDALRGQKEVVSAMQVGT 302


>02_04_0114 +
           19879468-19880671,19882007-19882179,19882265-19882605,
           19882698-19882977,19883070-19883267,19883380-19883652
          Length = 822

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -2

Query: 296 SGYLVVTNWSRFGFFSSVAAATSVGLTESSILGATSRIG*AG 171
           +G+L  + WS +G  SS  A      + S+++G+T R+  AG
Sbjct: 95  AGHLSSSQWSVWGPASSTNAVIKGDTSSSAVVGSTGRVLLAG 136


>01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384
          Length = 335

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 61  KRRRVTGSIFKMKVLLLCIAFAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVK 222
           KR    G +  ++ LLLC+A AA + A+P A      P  P+ E+  +   +V+
Sbjct: 96  KRIGSAGDLGWIEYLLLCLAPAAAAAALPCAATSPTPPC-PLRELLREYSAAVR 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,948
Number of Sequences: 37544
Number of extensions: 277342
Number of successful extensions: 884
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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