Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0820
         (656 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q89GH5 Cluster: ABC transporter permease protein; n=1; ...    33   6.0  
UniRef50_A6SGR7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q89GH5 Cluster: ABC transporter permease protein; n=1;
           Bradyrhizobium japonicum|Rep: ABC transporter permease
           protein - Bradyrhizobium japonicum
          Length = 288

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 194 FLTYITEAFTALPYIIII*IASWENCELQ*LFEMFSVNR-*NSHLDILYL 340
           +L Y + AF   PY+I + +A+     L  LFE F ++R  N HL  L L
Sbjct: 48  YLAYSSMAFLGAPYLIAVIVAALGTAALGYLFERFLLDRLVNDHLSTLML 97


>UniRef50_A6SGR7 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 757

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +1

Query: 352 IHATSNLKSVTLVYSKRNIQSYHIKLTQNM--I*TYLCNLKESKI*TKLRTPHFRVHHII 525
           + AT   +SVT   SK N ++Y+IK T  +      +CNL ++K   KLR  HF+  H  
Sbjct: 409 VTATDTRESVTYTVSKANAEAYNIKQTHVVAGFSCPICNL-DTKSMEKLRL-HFKTTH-- 464

Query: 526 KYRF*LH 546
            +RF  H
Sbjct: 465 -FRFTFH 470


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,694,570
Number of Sequences: 1657284
Number of extensions: 11390230
Number of successful extensions: 19206
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19185
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)