BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0820 (656 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 30 1.7 AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical... 28 6.7 AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 28 6.7 >Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical protein F14F8.13 protein. Length = 328 Score = 29.9 bits (64), Expect = 1.7 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = -1 Query: 506 KCGVLSFVHIFDSFRLHRYVYIIFC 432 +C V + ++ +F LH++V +IFC Sbjct: 286 RCNVHEVIDLYSTFDLHKFVKVIFC 310 >AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical protein Y77E11A.12a protein. Length = 544 Score = 27.9 bits (59), Expect = 6.7 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 6 FYYYMVYWNCYTLTLHF 56 FY+ VYW C+TL F Sbjct: 223 FYFLTVYWTCWTLLFAF 239 >AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical protein Y77E11A.12b protein. Length = 644 Score = 27.9 bits (59), Expect = 6.7 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 6 FYYYMVYWNCYTLTLHF 56 FY+ VYW C+TL F Sbjct: 323 FYFLTVYWTCWTLLFAF 339 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,281,260 Number of Sequences: 27780 Number of extensions: 294457 Number of successful extensions: 604 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 604 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1465835342 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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