Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0818
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 161 4e-40
03_01_0547 + 4093196-4093657,4094267-4095148 161 4e-40
03_01_0544 + 4082528-4082989,4083585-4084466 161 4e-40
03_01_0543 + 4076981-4077442,4078145-4079026 161 4e-40
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 101 6e-22
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 97 1e-20
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 96 2e-20
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 96 2e-20
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 95 4e-20
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 71 9e-13
02_04_0462 + 23131433-23132836 67 8e-12
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 37 0.010
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 37 0.014
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.024
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 34 0.072
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 33 0.17
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.22
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.29
03_05_0511 + 25056018-25059107 32 0.39
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 31 0.51
02_04_0148 - 20198407-20201424 31 0.51
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.51
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.68
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.68
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.2
01_06_0662 + 30987187-30987277,30987825-30990214 30 1.6
10_08_0016 + 14127200-14127615,14127723-14127816,14127904-141280... 29 2.1
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.1
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545... 29 2.7
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 29 2.7
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 29 2.7
01_01_0016 - 88825-90411 29 2.7
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 6.3
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 6.3
11_06_0412 - 23235670-23236512,23236804-23237838 27 8.3
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 8.3
05_05_0305 - 23970692-23970825,23972323-23973703 27 8.3
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 161 bits (391), Expect = 4e-40
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQ+I NKMD+T P + KEVSSY+KK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Score = 146 bits (354), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 161 bits (391), Expect = 4e-40
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQ+I NKMD+T P + KEVSSY+KK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Score = 146 bits (354), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 161 bits (391), Expect = 4e-40
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQ+I NKMD+T P + KEVSSY+KK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Score = 146 bits (354), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 161 bits (391), Expect = 4e-40
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQ+I NKMD+T P + KEVSSY+KK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180
Score = 146 bits (354), Expect = 1e-35
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 101 bits (241), Expect = 6e-22
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 445
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LL
Sbjct: 26 FETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLL 85
Query: 446 AFTLGVKQLIVGVNKMDST 502
A TLGV +L+V +NKMD +
Sbjct: 86 AKTLGVSKLVVVINKMDES 104
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHA 439
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
Query: 440 LLAFTLGVKQLIVGVNKMDSTE 505
L + GV LIV VNKMDS E
Sbjct: 367 QLVRSFGVDNLIVVVNKMDSVE 388
Score = 40.7 bits (91), Expect = 8e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 174 MGKGSFKYAWVLDKLKAERERGITIDI 254
+GKGSF YAW +D+ ERERGIT+ +
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTV 302
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = +2
Query: 269 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTRE 433
ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+E
Sbjct: 321 ETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKE 380
Query: 434 HALLAFTLGVKQLIVGVNKMDS 499
HA L + GV+QLIV VNKMD+
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMDA 402
Score = 87.8 bits (208), Expect = 6e-18
Identities = 36/70 (51%), Positives = 52/70 (74%)
Frame = +3
Query: 45 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 224
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 225 ERERGITIDI 254
ERERG+T+ +
Sbjct: 306 ERERGVTMTV 315
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = +2
Query: 269 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTRE 433
ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+E
Sbjct: 321 ETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKE 380
Query: 434 HALLAFTLGVKQLIVGVNKMDS 499
HA L + GV+QLIV VNKMD+
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMDA 402
Score = 87.8 bits (208), Expect = 6e-18
Identities = 36/70 (51%), Positives = 52/70 (74%)
Frame = +3
Query: 45 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 224
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 225 ERERGITIDI 254
ERERG+T+ +
Sbjct: 306 ERERGVTMTV 315
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +2
Query: 266 FETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTRE
Sbjct: 67 FETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTRE 126
Query: 434 HALLAFTLGVKQLIVGVNKMD 496
H LLA TLGV +LIV +NKMD
Sbjct: 127 HVLLAKTLGVAKLIVVINKMD 147
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +3
Query: 78 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 254
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEV 62
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/101 (35%), Positives = 59/101 (58%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
++ET+K + +D PGH D++KNMITG +Q D +L+V+A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 443 LAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIK 565
LA +GV L+ +NK+D+ + + + +E+ S+ K
Sbjct: 177 LARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYK 217
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 36 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 185
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 67.3 bits (157), Expect = 8e-12
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 127 EYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 179
Query: 443 LAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKE-VSSY 559
LA +GV +++V +NK D + + + +E +SSY
Sbjct: 180 LAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSY 219
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 27 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 185
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 234 RGITI 248
RGIT+
Sbjct: 103 RGITV 107
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 269 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 448
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 449 FTLGVKQLIVGVNKMD--STEPHTVSPDLRK 535
F + +I +NK+D + +P V L++
Sbjct: 183 FESNL-SIIPVINKIDQPTADPDNVKAQLKR 212
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 36.7 bits (81), Expect = 0.014
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 234 RGITIDILSGSSKLASTMLP-SLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 410
RGITI + + + P L L+DT S E R +A C L V S+ V
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 181
Query: 411 LRTV 422
+T+
Sbjct: 182 AQTL 185
Score = 31.1 bits (67), Expect = 0.68
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 460
Y + +ID PGH DF + + + A+L+V A G EA QT + LA
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALEND 195
Query: 461 VKQLIVGVNKMD--STEPHTVSPDLRK 535
+ ++I +NK+D EP V+ ++ +
Sbjct: 196 L-EIIPVLNKIDLPGAEPDRVAQEIEE 221
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 284 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 463
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 464 KQLIVGVNKMD 496
+ +I+ NK+D
Sbjct: 203 QHIIILQNKID 213
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 234 RGITI 248
+GITI
Sbjct: 120 KGITI 124
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
Y V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +3
Query: 48 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 227
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 228 RERGITI 248
+ERGITI
Sbjct: 151 QERGITI 157
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466
+T +D PGH F G + D VL+VAA G + + HA A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTL----EAMSHAKAANV---- 298
Query: 467 QLIVGVNKMDST 502
++V VNK D +
Sbjct: 299 PIVVAVNKCDKS 310
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
Y I+D PGH +F M AD AVL+V A G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCG 125
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 31.5 bits (68), Expect = 0.51
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 472
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 473 IVGVNKMDSTEPHTVSPD--LRKSKKEVSSYIKKNW 574
+V +NK+D PD ++K+ + S +K+ +
Sbjct: 560 VV-LNKVDRLCGWKHCPDAPIKKALENQSGDVKREF 594
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 234 RGITI 248
R IT+
Sbjct: 66 RAITM 70
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCG 125
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
+ ++D PGH DF + + AVL+V AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 3 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 125
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 3 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 125
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 125
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
K + + Y + +ID+PGH DF + D A+++V
Sbjct: 92 KRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 125
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 275 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>10_08_0016 +
14127200-14127615,14127723-14127816,14127904-14128033,
14128113-14128245,14128342-14128549,14128683-14128838
Length = 378
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 189 FKYAWVLDKLKAERERGITIDILSGSSKLASTMLP 293
F Y W+ ++++ E+ +G+ I GSSK+ ST P
Sbjct: 332 FTYFWIKEQIEKEKTQGVDI-AGYGSSKVVSTQAP 365
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>07_01_0714 -
5451246-5451408,5453401-5453534,5453608-5453796,
5454313-5454825,5455815-5456856,5457283-5457380,
5458224-5458451
Length = 788
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 156 EKEAQEMGKGSFKYAWVLDKLKAERERGITIDILSGSSKLASTMLPSLMLLDTEISS 326
++E E+ K S + +LD L AER +D L + +LAS L TEI++
Sbjct: 164 DQEPSEIQKWSADFPDMLDVLLAERRVDEALDALDEAERLASDAKLKQTLTATEIAA 220
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 449 FTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSS 556
FTL + L GV+ ++S E + S ++RKS K++++
Sbjct: 404 FTLSSESLKHGVDMLESVESNPKSSNIRKSLKDIAT 439
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 126 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDILSGSSKL 275
G+ I EKE +E+ + AWV+ L A +RGI++ +L G L
Sbjct: 263 GVLNAIIASLEKEDEELAT---EVAWVVVYLSALSDRGISLIVLRGLGNL 309
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 478 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 359
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 42 KTHINIVVIGHVDSG 86
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 409 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 275
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>11_06_0412 - 23235670-23236512,23236804-23237838
Length = 625
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +3
Query: 129 IDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI----LSGSSKLASTMLPS 296
+ K+T++ + A+EM KG + V DKL E ++ + D LSG+ ++ +
Sbjct: 500 VSKKTLQDTVQCAREMLKGCNSFQSVYDKLMEEPQKALVPDAHDMNLSGNILQQGAIMAN 559
Query: 297 LMLLDTE 317
++++ E
Sbjct: 560 ALIVNEE 566
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 409 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 275
D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 327 DRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
>05_05_0305 - 23970692-23970825,23972323-23973703
Length = 504
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 404 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSS 556
G+S T A+ A + + G+ +D EP++ S RKSK+ S
Sbjct: 77 GVSYTSYTNNGAIDATPISAYKTRPGIVSLDGDEPYSGSASGRKSKRSSGS 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,847,487
Number of Sequences: 37544
Number of extensions: 328584
Number of successful extensions: 927
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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