Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0818
(585 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 193 9e-52
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 193 9e-52
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 193 9e-52
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 186 1e-49
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 7e-04
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 25 0.72
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.96
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.2
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.9
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 6.7
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.9
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.9
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.9
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 193 bits (471), Expect = 9e-52
Identities = 94/105 (89%), Positives = 96/105 (91%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 3 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 62
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQLIVGVNKMDSTEP + KKEVSSYIKK
Sbjct: 63 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 107
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 193 bits (471), Expect = 9e-52
Identities = 94/105 (89%), Positives = 96/105 (91%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 19 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 78
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQLIVGVNKMDSTEP + KKEVSSYIKK
Sbjct: 79 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 123
Score = 41.1 bits (92), Expect = 8e-06
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 201 WVLDKLKAERERGITIDI 254
WVLDKLKAERERGITIDI
Sbjct: 1 WVLDKLKAERERGITIDI 18
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 193 bits (471), Expect = 9e-52
Identities = 94/105 (89%), Positives = 96/105 (91%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQLIVGVNKMDSTEP + KKEVSSYIKK
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Score = 159 bits (386), Expect = 2e-41
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 186 bits (454), Expect = 1e-49
Identities = 90/105 (85%), Positives = 94/105 (89%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSKKEVSSYIKK 568
HALLAFTLGVKQLIVGVNKMD T+P + KKEVSSYIKK
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Score = 159 bits (386), Expect = 2e-41
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.7 bits (76), Expect = 7e-04
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 467 QLIVGVNKMD 496
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.41
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 42 KTHINIVVIGHVDSGKST 95
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 24.6 bits (51), Expect = 0.72
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 570 FFLMYEETSFFDFLKSGLTVCG 505
+FL E F DF++ L CG
Sbjct: 126 YFLNSESKDFIDFIQKNLQCCG 147
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.96
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 51 INIVVIGHVDSGKST 95
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 272 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 373
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +2
Query: 188 LQICLGIGQTKG*A*AWYHNRYSLWK 265
L + L + T+ W+ NR + WK
Sbjct: 39 LNLALSLSLTETQVKIWFQNRRTKWK 64
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 132 DKRTIEKFEKEAQEMG 179
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 433 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 347
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 132 DKRTIEKFEKEAQEMG 179
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 132 DKRTIEKFEKEAQEMG 179
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,958
Number of Sequences: 438
Number of extensions: 3476
Number of successful extensions: 24
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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