BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0817 (284 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q54B72 Cluster: Putative uncharacterized protein; n=1; ... 34 0.53 UniRef50_A6TSA1 Cluster: ResB protein required for cytochrome c ... 30 8.6 >UniRef50_Q54B72 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 563 Score = 34.3 bits (75), Expect = 0.53 Identities = 16/42 (38%), Positives = 28/42 (66%) Frame = +1 Query: 58 YLKESNFES*IRISIDFRYQINN*KKNCLSLVFEIYCLLITF 183 YLK++N E ++++ D Y + + +C SL+FE+Y L+TF Sbjct: 70 YLKKANQEFFVQMAKDQNYTLED--GDCFSLLFEMYTFLVTF 109 >UniRef50_A6TSA1 Cluster: ResB protein required for cytochrome c biosynthesis-like protein precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep: ResB protein required for cytochrome c biosynthesis-like protein precursor - Alkaliphilus metalliredigens QYMF Length = 426 Score = 30.3 bits (65), Expect = 8.6 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 284 TGNG*IYIGSLLVRILFVENVRFF-FNSYTYVCTA 183 TGN YIGS L + F+ + F+ + YTYV TA Sbjct: 146 TGNNIRYIGSWLTHVGFLLIIIFYAYGQYTYVSTA 180 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 245,726,727 Number of Sequences: 1657284 Number of extensions: 3993599 Number of successful extensions: 6740 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 6614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6739 length of database: 575,637,011 effective HSP length: 72 effective length of database: 456,312,563 effective search space used: 10038876386 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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