Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0817
         (284 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   1.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   4.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   4.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   4.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 133 KNCLSLVFEIYCL 171
           KNC+ ++FE+Y L
Sbjct: 256 KNCVIVIFELYYL 268


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 142 LSLVFEIYCLLITFAVH 192
           L  ++  YC+ ITF VH
Sbjct: 53  LRRIYYFYCVSITFNVH 69



 Score = 20.6 bits (41), Expect = 3.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 142 LSLVFEIYCLLITFAVH 192
           L  ++  YC  I F VH
Sbjct: 143 LLCIYYFYCAFIIFTVH 159


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 154 FEIYCLLITFAVHTYV 201
           F+++   ITF  HTY+
Sbjct: 146 FDLFANGITFGWHTYI 161


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 133 KNC-LSLVFEIYCLLITFAVHTYV*ELKKNLTF 228
           KNC + ++F     LI FAV  Y   L+KN  F
Sbjct: 40  KNCTIVIIFH----LILFAVLLYFASLEKNPLF 68


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -3

Query: 60  VNHDKQHYFHYFCFFG 13
           +   K++ ++Y+ FFG
Sbjct: 107 IKKTKRYCYYYYAFFG 122


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 133 KNCLSLVFEIYCL 171
           KNC++ VF+++ L
Sbjct: 197 KNCVTYVFDLFYL 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,305
Number of Sequences: 336
Number of extensions: 1210
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)