BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0817 (284 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchan... 28 4.8 AF441482-1|AAM22406.1| 1105|Homo sapiens alternate SOS1 protein. 28 4.8 AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein. 28 4.8 BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain conta... 27 8.3 BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein. 27 8.3 AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein pr... 27 8.3 AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain conta... 27 8.3 AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain conta... 27 8.3 AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein pr... 27 8.3 AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens ... 27 8.3 AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens ... 27 8.3 AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. 27 8.3 >L13857-1|AAA35913.1| 1333|Homo sapiens guanine nucleotide exchange factor protein. Length = 1333 Score = 28.3 bits (60), Expect = 4.8 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 Query: 202 IRMYVRQMLSVSNKFRKPMISNFFFNC*FDTENLY 98 IR Y+R++ + FR+P +SN D EN++ Sbjct: 212 IRQYIRELNLIIKVFREPFVSNSKLFSANDVENIF 246 >AF441482-1|AAM22406.1| 1105|Homo sapiens alternate SOS1 protein. Length = 1105 Score = 28.3 bits (60), Expect = 4.8 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 Query: 202 IRMYVRQMLSVSNKFRKPMISNFFFNC*FDTENLY 98 IR Y+R++ + FR+P +SN D EN++ Sbjct: 212 IRQYIRELNLIIKVFREPFVSNSKLFSANDVENIF 246 >AC019171-1|AAX93186.1| 1304|Homo sapiens unknown protein. Length = 1304 Score = 28.3 bits (60), Expect = 4.8 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 Query: 202 IRMYVRQMLSVSNKFRKPMISNFFFNC*FDTENLY 98 IR Y+R++ + FR+P +SN D EN++ Sbjct: 183 IRQYIRELNLIIKVFREPFVSNSKLFSANDVENIF 217 >BC032446-1|AAH32446.1| 767|Homo sapiens cold shock domain containing E1, RNA-binding protein. Length = 767 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 506 NHDKEIFFHYSEFSGD 521 >BC021692-1|AAH21692.1| 272|Homo sapiens CSDE1 protein protein. Length = 272 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 11 NHDKEIFFHYSEFSGD 26 >AY049788-1|AAL15445.1| 708|Homo sapiens NRAS-related protein protein. Length = 708 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 506 NHDKEIFFHYSEFSGD 521 >AL096773-5|CAI18825.1| 798|Homo sapiens cold shock domain containing E1, RNA-binding protein. Length = 798 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 537 NHDKEIFFHYSEFSGD 552 >AL096773-4|CAI18826.1| 767|Homo sapiens cold shock domain containing E1, RNA-binding protein. Length = 767 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 506 NHDKEIFFHYSEFSGD 521 >AL050150-1|CAB43294.1| 369|Homo sapiens hypothetical protein protein. Length = 369 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 108 NHDKEIFFHYSEFSGD 123 >AK022528-1|BAB14080.1| 767|Homo sapiens protein ( Homo sapiens cDNA FLJ12466 fis, clone NT2RM1000826, highly similar to UNR PROTEIN. ). Length = 767 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 506 NHDKEIFFHYSEFSGD 521 >AK022516-1|BAB14073.1| 767|Homo sapiens protein ( Homo sapiens cDNA FLJ12454 fis, clone NT2RM1000555, highly similar to UNR PROTEIN. ). Length = 767 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 506 NHDKEIFFHYSEFSGD 521 >AB020692-1|BAA74908.2| 826|Homo sapiens KIAA0885 protein protein. Length = 826 Score = 27.5 bits (58), Expect = 8.3 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -3 Query: 57 NHDKQHYFHYFCFFGD 10 NHDK+ +FHY F GD Sbjct: 565 NHDKEIFFHYSEFSGD 580 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 34,642,310 Number of Sequences: 237096 Number of extensions: 582161 Number of successful extensions: 601 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 600 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 601 length of database: 76,859,062 effective HSP length: 71 effective length of database: 60,025,246 effective search space used: 1380580658 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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