Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0815
(579 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533477-1|CAG38508.1| 274|Homo sapiens TOLLIP protein. 34 0.42
BC018272-1|AAH18272.1| 274|Homo sapiens toll interacting protei... 34 0.42
BC012057-1|AAH12057.1| 274|Homo sapiens toll interacting protei... 34 0.42
BC004420-1|AAH04420.1| 274|Homo sapiens toll interacting protei... 34 0.42
AY730683-1|AAX22229.1| 274|Homo sapiens toll interacting protei... 34 0.42
AK022871-1|BAB14283.1| 205|Homo sapiens protein ( Homo sapiens ... 34 0.42
AJ242972-1|CAB58118.1| 273|Homo sapiens TOLLIP protein protein. 34 0.42
AB209541-1|BAD92778.1| 352|Homo sapiens toll interacting protei... 34 0.42
AK096693-1|BAC04844.1| 213|Homo sapiens protein ( Homo sapiens ... 31 2.2
U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5... 30 6.8
DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase... 30 6.8
BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase... 30 6.8
AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein. 30 6.8
>CR533477-1|CAG38508.1| 274|Homo sapiens TOLLIP protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 160 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 220 PAAVNAQPRCSEEDLK 235
>BC018272-1|AAH18272.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 160 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 220 PAAVNAQPRCSEEDLK 235
>BC012057-1|AAH12057.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 160 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 220 PAAVNAQPRCSEEDLK 235
>BC004420-1|AAH04420.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 160 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 220 PAAVNAQPRCSEEDLK 235
>AY730683-1|AAX22229.1| 274|Homo sapiens toll interacting protein
protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 160 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 219
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 220 PAAVNAQPRCSEEDLK 235
>AK022871-1|BAB14283.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ12809 fis, clone NT2RP2002408, highly similar to
Homo sapiens mRNA for TOLLIP protein. ).
Length = 205
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 91 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 150
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 151 PAAVNAQPRCSEEDLK 166
>AJ242972-1|CAB58118.1| 273|Homo sapiens TOLLIP protein protein.
Length = 273
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 159 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 218
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 219 PAAVNAQPRCSEEDLK 234
>AB209541-1|BAD92778.1| 352|Homo sapiens toll interacting protein
variant protein.
Length = 352
Score = 33.9 bits (74), Expect = 0.42
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 204 DDEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDS 383
DD+E +++ +SYA + A PP +P ++ G GY P P +
Sbjct: 191 DDKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALP 250
Query: 384 PKIKHLQVQCEKTHMR 431
P + Q +C + ++
Sbjct: 251 PAAVNAQPRCSEEDLK 266
>AK096693-1|BAC04844.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ39374 fis, clone PEBLM2008576, highly similar to
Homo sapiens mRNA for TOLLIP protein. ).
Length = 213
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/75 (22%), Positives = 32/75 (42%)
Frame = +3
Query: 207 DEEDQVDIGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDSP 386
D+E +++ +SYA + A PP +P ++ G GY P P + P
Sbjct: 100 DKEGMINLVMSYALLPAAMVMPPQPVVLMPTVYQQGVGYVPITGMPAVCSPGMVPVALPP 159
Query: 387 KIKHLQVQCEKTHMR 431
+ Q +C + ++
Sbjct: 160 AAVNAQPRCSEEDLK 174
>U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5
activator isoform p39i protein.
Length = 367
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 228 IGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDSP 386
+ + P ATCEPP ++ +GGG PP P P P P P
Sbjct: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP-----PAPQVAPPVP 170
>DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 228 IGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDSP 386
+ + P ATCEPP ++ +GGG PP P P P P P
Sbjct: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP-----PAPQVAPPVP 170
>BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 228 IGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDSP 386
+ + P ATCEPP ++ +GGG PP P P P P P
Sbjct: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP-----PAPQVAPPVP 170
>AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 228 IGISYAPIKEATCEPPVDSASLPLEHRAGGGYCPPLAPAHADDPWPLATPDSP 386
+ + P ATCEPP ++ +GGG PP P P P P P
Sbjct: 123 VPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP-----PAPQVAPPVP 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,162,510
Number of Sequences: 237096
Number of extensions: 1613300
Number of successful extensions: 4037
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4032
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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