BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0810 (562 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 29 2.5 07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073... 29 3.4 03_06_0397 - 33624883-33625484,33625569-33625632,33625663-336257... 28 4.4 01_06_0408 - 29125758-29126391,29126513-29126642,29126743-29126887 28 4.4 11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 27 7.7 11_01_0690 - 5690427-5690529,5693619-5693792,5694511-5694809 27 7.7 08_02_1316 - 26088302-26088405,26089203-26089317 27 7.7 03_05_0356 - 23421394-23421870 27 7.7 >05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352, 3501419-3501536,3502815-3502945,3503027-3503299, 3504825-3504882,3505065-3505388,3507404-3507852, 3509514-3509554,3510263-3510412,3510519-3510906 Length = 706 Score = 29.1 bits (62), Expect = 2.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 360 VPQASTRGAASASYSTVGDAAVGTRQRVTRWRTRAI 253 V A T GA+ GDA+ +RVTR R+R + Sbjct: 17 VGAAGTAGASPVGVGPAGDASAAAGRRVTRLRSREL 52 >07_03_1343 - 25905475-25905678,25907025-25907167,25907273-25907366, 25907526-25907687,25907884-25907952,25908631-25908843, 25909054-25909113,25909294-25909382,25909745-25910063 Length = 450 Score = 28.7 bits (61), Expect = 3.4 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -2 Query: 372 HGGRVPQASTRGAASASYSTVGDAAVGTRQRVTRWRTRAIH 250 +GG V + AASAS+++ VGTR + RWR + +H Sbjct: 40 NGGGVERRLRSSAASASWASHLPLEVGTRV-MCRWRDQKLH 79 >03_06_0397 - 33624883-33625484,33625569-33625632,33625663-33625744, 33626081-33626649 Length = 438 Score = 28.3 bits (60), Expect = 4.4 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +2 Query: 5 FLCLLLNFIVHFYTIDTARPAP 70 FL LL+ +V+FYT+D + +P Sbjct: 157 FLSLLIGLLVYFYTVDPRKVSP 178 >01_06_0408 - 29125758-29126391,29126513-29126642,29126743-29126887 Length = 302 Score = 28.3 bits (60), Expect = 4.4 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 88 DPGSEARGWSCGVDCVEVNNKIE 20 + S + W+CGV EVNN +E Sbjct: 218 ESSSNSSNWNCGVGAPEVNNALE 240 >11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715, 7885746-7885874,7885995-7886151,7886248-7886350, 7887050-7887103,7887334-7887451,7888549-7888700, 7890166-7891852 Length = 897 Score = 27.5 bits (58), Expect = 7.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 Query: 293 PTAASPTVEYDALAAPRVLACGTRPPCC 376 P + T A +P VLACG+ P C Sbjct: 161 PAVSGATPPIHASISPEVLACGSATPAC 188 >11_01_0690 - 5690427-5690529,5693619-5693792,5694511-5694809 Length = 191 Score = 27.5 bits (58), Expect = 7.7 Identities = 11/36 (30%), Positives = 17/36 (47%) Frame = -2 Query: 363 RVPQASTRGAASASYSTVGDAAVGTRQRVTRWRTRA 256 R +A+ GA +A+++ GDA WR A Sbjct: 22 RAIRAAVEGAVAAAFAAAGDAVAAAADAAAGWRDAA 57 >08_02_1316 - 26088302-26088405,26089203-26089317 Length = 72 Score = 27.5 bits (58), Expect = 7.7 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = +2 Query: 254 MARVRQRVTRCRVPTAASPTVEYDALAAPRVLA 352 MA R CR AASP EY A A R A Sbjct: 1 MAPPAHRPASCRTSPAASPCCEYSAACAFRATA 33 >03_05_0356 - 23421394-23421870 Length = 158 Score = 27.5 bits (58), Expect = 7.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 260 RVRQRVTRCRVPTAASPTVEYDALAAPRVLACGTRPPC 373 RV ++ T+ P AASP + A +AP V + PC Sbjct: 102 RVARKETKKMPPAAASPALADIASSAPTVYSKNAAAPC 139 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,222,304 Number of Sequences: 37544 Number of extensions: 201527 Number of successful extensions: 515 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 515 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1281410928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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