Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0810
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.56 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.0  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 118 F*IITVYCQSDPGSEARGWSCGVDC 44
           F I  +Y  S PG+   GW+CGV C
Sbjct: 396 FQISDIYWCSPPGN---GWACGVSC 417



 Score = 26.6 bits (56), Expect = 0.56
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 139 KDSGIY*F*IITVYCQSDPGSEARGWSCGVDCVEVNN 29
           +D G+  F I  +Y  S PG   +GW CG+ C ++ +
Sbjct: 704 EDHGL--FQISDIYWCSPPG---KGWVCGLSCADLED 735



 Score = 25.8 bits (54), Expect = 0.97
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 100 YCQSDPGSEARGWSCGVDCVEVNN 29
           Y  S PG   RGW CG+ C ++ +
Sbjct: 560 YWCSPPG---RGWVCGISCAQLRD 580


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 10  MFITQFYCSLLHNRHRTTSP 69
           M +   YC LL+NR RT  P
Sbjct: 704 MDLDSIYCKLLYNRGRTYVP 723


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 82  GSEARGWSCGVDCVEVNNK 26
           GS   GWS  VDCV ++ +
Sbjct: 460 GSMGVGWSLQVDCVYIDRR 478


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 82  GSEARGWSCGVDCVEVNNK 26
           GS   GWS  VDCV ++ +
Sbjct: 461 GSMGVGWSLQVDCVYIDRR 479


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 291 TRQRVTRWRTRAIHGKLY 238
           TR+  TRWRTR    +L+
Sbjct: 229 TRESGTRWRTRHFDAELF 246


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 16  ITQFYCSLLHNRHRTTSPAL 75
           I   YC L++NR R+  P +
Sbjct: 742 IETVYCKLMYNRERSYIPLI 761


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,997
Number of Sequences: 2352
Number of extensions: 8525
Number of successful extensions: 56
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)