BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0810 (562 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical pr... 28 5.3 U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical pr... 27 7.0 >Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical protein T21H8.2 protein. Length = 361 Score = 27.9 bits (59), Expect = 5.3 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2 Query: 258 AIHGKLYIV*IKLTLCK*LANCF*IIFIYLRFKF 157 A+ G LY+V C F ++IY+RF F Sbjct: 18 AVRGALYLVPSFFNTCSAAGTFFVFVYIYIRFSF 51 >U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical protein B0207.8 protein. Length = 141 Score = 27.5 bits (58), Expect = 7.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -2 Query: 162 KFFNAFTEKTQEFINFKLLQYTVNQ 88 KF N F E T +F+NF+ + + N+ Sbjct: 98 KFKNGFCENTMKFVNFQNINRSTNE 122 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,772,629 Number of Sequences: 27780 Number of extensions: 185569 Number of successful extensions: 393 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 393 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1155524042 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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